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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX89388 Canola cytosol 70.82 79.82
CDY66012 Canola mitochondrion 93.77 66.03
CDY42774 Canola mitochondrion 83.66 56.73
CDX94406 Canola golgi 83.66 56.73
CDX92736 Canola mitochondrion 83.66 56.73
AT4G25870.1 Thale cress cytosol, golgi, mitochondrion, plastid 83.27 55.01
CDY25922 Canola golgi 74.71 49.36
CDY38285 Canola golgi 74.32 49.1
CDX88613 Canola golgi 72.76 48.07
CDY11878 Canola golgi 72.37 47.81
CDY57290 Canola cytosol 63.03 46.82
CDY46724 Canola mitochondrion 64.59 41.19
CDY03552 Canola golgi, mitochondrion 64.2 41.15
CDY30178 Canola mitochondrion 64.2 41.04
HORVU2Hr1G100480.3 Barley cytosol 51.75 40.92
CDY03361 Canola mitochondrion 60.31 39.24
CDX83505 Canola mitochondrion 60.7 39.2
CDY12850 Canola mitochondrion 60.7 39.2
CDY66853 Canola mitochondrion 60.31 39.14
CDY01412 Canola mitochondrion 60.7 39.1
Solyc07g008940.2.1 Tomato golgi 59.53 38.93
PGSC0003DMT400073984 Potato golgi 59.14 38.68
Zm00001d024348_P002 Maize mitochondrion 55.25 38.38
VIT_11s0103g00490.t01 Wine grape golgi, plastid 59.92 38.21
KRH19073 Soybean golgi 57.98 37.91
CDX80552 Canola cytosol 22.57 37.91
CDY51089 Canola golgi, mitochondrion 57.59 37.47
KXG24737 Sorghum golgi 55.64 37.34
CDY28259 Canola golgi 54.47 37.23
CDX68738 Canola golgi 54.47 37.23
CDX82625 Canola mitochondrion 57.2 37.22
Zm00001d026261_P001 Maize golgi, mitochondrion 55.25 37.08
EES12818 Sorghum golgi 54.47 36.18
KRH02808 Soybean golgi 57.98 35.48
TraesCS2D01G428700.2 Wheat mitochondrion 52.14 35.26
Zm00001d002382_P002 Maize golgi, mitochondrion 52.92 35.14
TraesCS2B01G452200.4 Wheat mitochondrion 51.75 35.0
TraesCS2A01G430900.2 Wheat mitochondrion 50.97 33.94
Os08t0225400-01 Rice cytosol, golgi 53.7 33.41
CDY14193 Canola mitochondrion 64.98 31.87
CDX73016 Canola mitochondrion 36.97 27.38
CDX78440 Canola cytosol 34.24 27.24
CDY26504 Canola cytosol 15.56 26.32
CDY31036 Canola golgi 36.97 25.2
CDX93443 Canola golgi 37.35 25.0
CDY20644 Canola golgi 37.74 24.87
CDX69735 Canola golgi 37.35 24.87
CDX97139 Canola golgi 37.35 24.87
CDX97141 Canola golgi 37.35 24.87
CDX94911 Canola golgi 36.97 24.68
CDY51451 Canola golgi 36.58 24.67
CDY43927 Canola golgi 36.97 24.42
CDY20597 Canola golgi 32.3 24.41
CDY56916 Canola cytosol, golgi, plasma membrane, plastid 36.19 24.41
CDX87842 Canola golgi 36.58 24.16
CDY19328 Canola golgi, mitochondrion 35.41 24.07
CDX78674 Canola cytosol, golgi, plasma membrane 37.74 24.07
CDX78439 Canola golgi 36.97 23.69
CDX70417 Canola cytosol 27.63 23.67
CDX97140 Canola golgi 37.35 23.41
CDX70676 Canola cytosol, golgi, nucleus 36.58 23.38
CDX69574 Canola mitochondrion 33.07 23.22
CDX69465 Canola golgi 36.58 23.21
CDY24895 Canola mitochondrion 33.46 23.06
CDY09869 Canola mitochondrion 32.68 22.95
CDX96025 Canola golgi, vacuole 36.97 22.84
CDY08638 Canola mitochondrion 33.46 22.69
CDY59035 Canola golgi 36.97 22.57
CDX96026 Canola golgi 33.85 21.97
CDX70416 Canola golgi 36.97 21.74
CDX88209 Canola golgi 29.57 21.71
CDX81507 Canola golgi 34.63 21.71
CDY44904 Canola golgi 34.63 21.71
CDY34605 Canola golgi 31.52 21.43
CDY31228 Canola golgi 29.96 20.81
CDY21023 Canola golgi 30.35 20.74
CDY70337 Canola golgi 27.63 19.03
CDY66259 Canola cytosol 28.02 16.74
CDX97918 Canola golgi 33.07 13.47
CDX73017 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:CDY49466EnsemblPlantsGene:GSBRNA2T00093111001GO:A0A078IHJ9GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0008375GO:GO:0016020GO:GO:0016740InterPro:Glyco_trans_14PANTHER:PTHR31042PANTHER:PTHR31042:SF1
PFAM:PF02485ProteinID:CDY49466ProteinID:CDY49466.1UniParc:UPI0004EE6A15UniProt:A0A078IHJ9MapMan:35.1
Description
BnaCnng17320DBnaCnng17320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IHJ9]
Coordinates
chrLK032835:+:6073..7829
Molecular Weight (calculated)
30297.8 Da
IEP (calculated)
6.794
GRAVY (calculated)
-0.426
Length
257 amino acids
Sequence
(BLAST)
001: MQDIISLLWD EFFKGHEGKF SIYIHTFKER PIHISPHFYD REIHSDENQH FVLLSESCIP LHTFDYTYRY LLYSNVSFIE SFVDPGPHGT GRHMEHMLPE
101: ITKENFRKGA QWFTMKREHA VIVMADSLYY SKFSKYCGLG LESNKNCTAD EHYLATFFSK IDPMGISNWS VTYVDWSKRR RHPKTYRAHE ISLEFMNSVS
201: SEEMSVHVTS LGEHGELHWP CTWNGITRPC YLFARKFHPD ALDTLVNLFQ NYTSTVV
Best Arabidopsis Sequence Match ( AT4G25870.1 )
(BLAST)
001: MGETQKILQG PRHHTSLKKP LWVVLTVSVT SMLLICTHMY PKHGKSSSCH GLYSTRGCED ALSKWLPVHV RKFTDEEIAA RAVVRDILRT PPFITNNSKI
101: AFLFLTPGTL PFEKLWDEFF KGHEGKFSIY IHPSKERPVH ISRHFSDREI HSDEVTWGRI SMVDAEKRLL VSALEDPDNQ HFVLVSESCI PLHTFDYTYR
201: YLLYSNVSFI ESFVDPGPHG TGRHMEHMLP EIAKEDFRKG AQWFTMKRQH AIIVMADGLY YSKFREYCGP GIEADKNCIA DEHYLPTFFN MIDPMGISNW
301: SVTFVDWSER RWHPKTYGGN EISLEFMKNV TSEDMSVHVT SVGKHGDELH WPCTWNGIKR PCYLFARKFH PDTLDTLVNL FPNYTNTAV
Arabidopsis Description
At4g25870 [Source:UniProtKB/TrEMBL;Acc:Q9SVZ8]
SUBAcon: [mitochondrion,golgi,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.