CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015963.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	94.24	93.43
AT1G73810.1	Thale cress	golgi, nucleus, peroxisome	75.79	62.92
VIT_17s0000g03400.t01	Wine grape	cytosol	51.01	59.8
PGSC0003DMT400037735	Potato	cytosol	35.16	59.22
VIT_17s0000g03410.t01	Wine grape	cytosol	48.13	56.61
PGSC0003DMT400014396	Potato	cytosol	47.55	55.74
GSMUA_Achr6P09800_001	Banana	cytosol	44.38	55.4
TraesCS1D01G394500.1	Wheat	mitochondrion	44.96	53.42
HORVU1Hr1G085260.1	Barley	cytosol	35.16	50.83
KRH60391	Soybean	golgi, plastid	52.74	48.67
KRH41690	Soybean	golgi	51.01	47.58
CDX78440	Canola	cytosol	44.09	47.37
PGSC0003DMT400037733	Potato	golgi	51.87	46.75
Solyc05g009120.2.1	Tomato	nucleus	51.3	45.64
VIT_01s0011g03850.t01	Wine grape	golgi, plastid	53.03	45.43
Solyc05g009110.1.1	Tomato	golgi	48.99	44.16
CDX70417	Canola	cytosol	38.04	44.0
CDX80552	Canola	cytosol	19.31	43.79
CDX69735	Canola	golgi	47.26	42.49
CDX96025	Canola	golgi, vacuole	50.72	42.31
Solyc12g036400.1.1	Tomato	extracellular	50.14	42.23
CDX97139	Canola	golgi	46.97	42.23
CDX97141	Canola	golgi	46.97	42.23
CDY44904	Canola	golgi	49.86	42.2
CDX81507	Canola	golgi	49.86	42.2
KRH35920	Soybean	golgi, plasma membrane	50.43	42.17
KRH38159	Soybean	golgi	52.74	41.88
CDY59035	Canola	golgi	50.72	41.81
KRG90861	Soybean	golgi, plasma membrane	50.72	41.81
PGSC0003DMT400013770	Potato	golgi	49.57	41.75
CDX96026	Canola	golgi	47.55	41.67
KRH39163	Soybean	golgi	52.74	40.58
KRH48513	Soybean	golgi	52.16	40.49
CDY31036	Canola	golgi	43.8	40.32
Solyc03g119260.2.1	Tomato	golgi, nucleus, plasma membrane	49.28	40.14
CDX78439	Canola	golgi	45.82	39.65
CDY51451	Canola	golgi	43.52	39.63
CDX87842	Canola	golgi	44.38	39.59
CDY19328	Canola	golgi, mitochondrion	42.65	39.15
CDY56916	Canola	cytosol, golgi, plasma membrane, plastid	42.94	39.11
CDY43927	Canola	golgi	43.8	39.07
CDX97140	Canola	golgi	46.11	39.02
CDX94911	Canola	golgi	43.23	38.96
CDX93443	Canola	golgi	42.94	38.8
CDY20597	Canola	golgi	37.75	38.53
CDY20644	Canola	golgi	43.23	38.46
CDX89388	Canola	cytosol	25.07	38.16
Os02t0327500-01	Rice	golgi	47.84	37.81
CDX70676	Canola	cytosol, golgi, nucleus	43.52	37.56
CDX69465	Canola	golgi	43.8	37.53
CDX78674	Canola	cytosol, golgi, plasma membrane	43.23	37.22
Zm00001d016103_P001	Maize	golgi, plasma membrane, plastid	47.84	37.22
CDX88209	Canola	golgi	37.46	37.14
CDY49466	Canola	cytosol	27.38	36.97
Zm00001d053393_P002	Maize	golgi, plastid	47.55	36.75
CDX70416	Canola	golgi	45.53	36.16
CDY26504	Canola	cytosol	15.56	35.53
TraesCS1B01G413900.1	Wheat	golgi, mitochondrion	46.97	35.13
CDY70337	Canola	golgi	37.75	35.12
OQU84731	Sorghum	plastid	47.84	34.58
CDY42774	Canola	mitochondrion	36.89	33.77
CDX94406	Canola	golgi	36.6	33.51
TraesCS1A01G386500.1	Wheat	golgi, mitochondrion	44.96	33.4
CDX92736	Canola	mitochondrion	36.31	33.25
CDX68738	Canola	golgi	35.73	32.98
CDY28259	Canola	golgi	35.73	32.98
CDX82625	Canola	mitochondrion	37.46	32.91
CDY03361	Canola	mitochondrion	37.46	32.91
CDY66853	Canola	mitochondrion	37.46	32.83
CDY46724	Canola	mitochondrion	38.04	32.75
CDY12850	Canola	mitochondrion	37.46	32.66
CDX83505	Canola	mitochondrion	37.46	32.66
CDY11878	Canola	golgi	36.6	32.65
CDY38285	Canola	golgi	36.6	32.65
CDX88613	Canola	golgi	36.6	32.65
CDY01412	Canola	mitochondrion	37.46	32.58
CDY03552	Canola	golgi, mitochondrion	37.46	32.42
CDY25922	Canola	golgi	36.31	32.39
CDY30178	Canola	mitochondrion	37.46	32.34
CDY51089	Canola	golgi, mitochondrion	36.02	31.65
CDY21023	Canola	golgi	33.14	30.59
CDY66012	Canola	mitochondrion	31.99	30.41
CDY31228	Canola	golgi	32.28	30.27
CDY34605	Canola	golgi	32.56	29.89
CDY24895	Canola	mitochondrion	31.7	29.49
HORVU1Hr1G085240.4	Barley	golgi, mitochondrion, plastid	39.77	29.36
CDY09869	Canola	mitochondrion	30.84	29.23
CDX69574	Canola	mitochondrion	30.84	29.23
CDY08638	Canola	mitochondrion	31.41	28.76
CDY57290	Canola	cytosol	28.53	28.61
CDY14193	Canola	mitochondrion	38.04	25.19
CDY66259	Canola	cytosol	28.53	23.02
CDX97918	Canola	golgi	40.92	22.5
CDX73017	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDX73016	EnsemblPlantsGene:GSBRNA2T00103457001	GO:A0A078C7J0	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF7
PFAM:PF02485	ProteinID:CDX73016	ProteinID:CDX73016.1	SEG:seg	UniParc:UPI0004EE5DC4	MapMan:35.1

Description

BnaC06g34640D

Coordinates

chrLK031797:-:1677537..1679333

Molecular Weight (calculated)

40553.6 Da

IEP (calculated)

9.939

GRAVY (calculated)

-0.535

Length

347 amino acids

Sequence
(BLAST)

001: MRNVSFSPQL FRLSSPSLSP QLQPQPENSN ETVVPEGQKG PSPVEFEKVK HHNMTEEEEL MWRALEVQER PSTVKKKVAF MFLTRGKLPL AKLWERFFNG
101: HQGLFSVYVH TSNLSYVDDG IPETSPFYRR RIPSKEVKWG MVSMVEAERR LLANALLDAA NQRFVLLSET DIPLFNFSTI YSYLINSQHS FVDLYDLPGP
201: AGRGRYNRRM SPVITRSKWR KGSQWFEIDR EIAVAVVSDY TYFPLFKKHC HWGCYADEHY LPTFVHVMFP GKNANRSLTW TDWSRRGPHP RKYTRRSVRA
301: ELLTKLRNRE GCVYNGKESN KCYLFARKFD DTCIDMLIHF AGRTMGF

Best Arabidopsis Sequence Match ( AT1G73810.1 )
(BLAST)

001: MKKSQETQED SLQQESRHQL HQIVISKILR SHRFFQNLVL YSFLIGFGFG LGFILNVHIR NVSFNPQLFR LSSLSPSSFS TPPLQPQPEI VVPLNDTVVA
101: TNDDDHEVGQ KGHYLMMPEN VVHNMTEEEL LLRASKIQEK TLKMTKKAAF MFLTRGKLPL AKLWERFFKG HEGLFSIYIH TSDPFYFDDH TPETSPFYRR
201: RIPSKEVGWG MVSMVAAERR LLANALLDAG NHRFVLLSES DIPLFNFSTI YSYLINSQHS YVDVYDLPGP AGRGRYNRRM SPVISRTNWR KGSQWFEIDR
301: EVALAVVSDT TYFPVFEKYC LWNCYADEHY LSTFVHAMFP GKNANRSLTW TDWSRRGPHP RKYTRRSVTG EFLRRVRNRE QGCVYNGKKS EKCYLFARKF
401: DGSTLDKLLY FAHSVMGF

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9C9T1]
SUBAcon: [peroxisome,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.