CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66853	Canola	mitochondrion	99.24	98.99
Bra036729.1-P	Field mustard	mitochondrion	98.73	98.48
CDY12850	Canola	mitochondrion	88.35	87.69
CDX83505	Canola	mitochondrion	88.35	87.69
CDY01412	Canola	mitochondrion	88.1	87.22
AT2G19160.1	Thale cress	golgi, mitochondrion	85.57	85.79
CDX82625	Canola	mitochondrion	82.28	82.28
CDY51089	Canola	golgi, mitochondrion	81.52	81.52
CDY03552	Canola	golgi, mitochondrion	76.2	75.06
CDY30178	Canola	mitochondrion	74.94	73.63
CDY46724	Canola	mitochondrion	74.68	73.2
CDX89388	Canola	cytosol	38.73	67.11
KRH19073	Soybean	golgi	64.3	64.63
Solyc07g008940.2.1	Tomato	golgi	62.03	62.34
CDX88613	Canola	golgi	61.01	61.95
PGSC0003DMT400073984	Potato	golgi	61.52	61.83
CDY38285	Canola	golgi	60.76	61.7
CDY25922	Canola	golgi	60.76	61.7
CDY11878	Canola	golgi	60.76	61.7
CDX94406	Canola	golgi	58.48	60.95
KRH02808	Soybean	golgi	64.56	60.71
CDY49466	Canola	cytosol	39.24	60.31
VIT_11s0103g00490.t01	Wine grape	golgi, plastid	61.52	60.3
CDY42774	Canola	mitochondrion	57.72	60.16
CDX92736	Canola	mitochondrion	56.96	59.37
HORVU2Hr1G100480.3	Barley	cytosol	48.61	59.08
CDY14193	Canola	mitochondrion	76.96	58.02
Zm00001d026261_P001	Maize	golgi, mitochondrion	54.94	56.66
KXG24737	Sorghum	golgi	54.94	56.66
CDX68738	Canola	golgi	53.67	56.38
CDY28259	Canola	golgi	53.67	56.38
EES12818	Sorghum	golgi	55.19	56.33
Zm00001d024348_P002	Maize	mitochondrion	52.41	55.95
Zm00001d002382_P002	Maize	golgi, mitochondrion	54.68	55.81
TraesCS2B01G452200.4	Wheat	mitochondrion	52.91	55.0
TraesCS2D01G428700.2	Wheat	mitochondrion	52.66	54.74
CDY66012	Canola	mitochondrion	49.87	53.97
TraesCS2A01G430900.2	Wheat	mitochondrion	52.41	53.63
Os08t0225400-01	Rice	cytosol, golgi	53.16	50.85
CDY57290	Canola	cytosol	44.3	50.58
CDX80552	Canola	cytosol	14.94	38.56
CDX78440	Canola	cytosol	31.14	38.08
CDX73016	Canola	mitochondrion	32.91	37.46
CDX70417	Canola	cytosol	26.84	35.33
CDY43927	Canola	golgi	34.68	35.22
CDX87842	Canola	golgi	34.68	35.22
CDX97141	Canola	golgi	34.18	34.97
CDX97139	Canola	golgi	34.18	34.97
CDX69735	Canola	golgi	33.67	34.46
CDY19328	Canola	golgi, mitochondrion	32.66	34.13
CDX78439	Canola	golgi	34.43	33.92
CDY51451	Canola	golgi	32.41	33.6
CDX88209	Canola	golgi	29.62	33.43
CDX69574	Canola	mitochondrion	30.89	33.33
CDY08638	Canola	mitochondrion	31.9	33.25
CDY24895	Canola	mitochondrion	31.39	33.24
CDY56916	Canola	cytosol, golgi, plasma membrane, plastid	31.9	33.07
CDY09869	Canola	mitochondrion	30.63	33.06
CDY31036	Canola	golgi	31.39	32.89
CDX93443	Canola	golgi	31.9	32.81
CDX94911	Canola	golgi	31.9	32.73
CDX97140	Canola	golgi	33.92	32.68
CDY34605	Canola	golgi	30.89	32.28
CDY20644	Canola	golgi	31.65	32.05
CDY31228	Canola	golgi	29.62	31.62
CDY20597	Canola	golgi	27.09	31.47
CDY21023	Canola	golgi	29.87	31.38
CDX69465	Canola	golgi	31.9	31.11
CDX96026	Canola	golgi	31.14	31.06
CDX78674	Canola	cytosol, golgi, plasma membrane	31.65	31.02
CDX70676	Canola	cytosol, golgi, nucleus	31.39	30.85
CDX96025	Canola	golgi, vacuole	32.15	30.53
CDX70416	Canola	golgi	33.67	30.43
CDX81507	Canola	golgi	31.39	30.24
CDY59035	Canola	golgi	32.15	30.17
CDY44904	Canola	golgi	31.14	30.0
CDY26504	Canola	cytosol	11.39	29.61
CDY70337	Canola	golgi	25.06	26.54
CDY66259	Canola	cytosol	27.34	25.12
CDX97918	Canola	golgi	31.14	19.49
CDX73017	Canola	cytosol	0.51	14.29

Protein Annotations

EnsemblPlants:CDY03361	EnsemblPlantsGene:GSBRNA2T00115987001	GO:A0A078EQ60	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF1
PFAM:PF02485	ProteinID:CDY03361	ProteinID:CDY03361.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EDFA21
MapMan:35.1	:	:	:	:	:

Description

BnaC09g09870D

Coordinates

chrLK031942:-:1083884..1087858

Molecular Weight (calculated)

45694.8 Da

IEP (calculated)

8.375

GRAVY (calculated)

-0.342

Length

395 amino acids

Sequence
(BLAST)

001: MKAVKGWLLG RTSYTQSLPG ARHHRTPTKK RVWITAVVSL ITMFVIGAYM FPHHRNSACY MFSSNGCKAL TDWLPPSPRE FSDDEVAARV VISEMLSSPR
101: VIEKTSKIAF MFLTPGTLPF EKLWDLFLEG HEGKFSVYIH ASKDTPVHTS RYFLNREIRS DEVIWGRISM IDAERRLLTN ALRDPENQQF VLLSDSCVPL
201: RSFEYMYNYM MYSNVSYVDC FDDPGPHGTG RHMDHMLPEI PKEDFRKGAQ WFSMKRQHAV ITVADSLYYS KFRDYCRPGV ESNKNCIADE HYLPTFFHML
301: DPGGIANWTV TYVDWSEKKW HPRTYLPNDV THELLKNLTS IDAVSRVTSE GTGEVTWTPC MWNGIKRPCY LFGRKFHAAT LNKLIDLFPN YTSMA

Best Arabidopsis Sequence Match ( AT2G19160.2 )
(BLAST)

001: MKAIKGWRLG KINYMQSLPG ARHRAPTRKP IWIIAVLSLI AMFVIGAYMF PHHSKAACYM FSSKGCKGLT DWLPPSLREY SDDEIAARVV ISEILSSPRV
101: IKKSSKIAFM FLTPGTLPFE KLWDLFFQGH EGKFSVYIHA SKDTPVHTSR YFLNREIRSD EVVWGRISMI DAERRLLTNA LRDPENQQFV LLSDSCVPLR
201: SFEYMYNYMM HSNVSYVDCF DDPGPHGTGR HMDHMLPEIP REDFRKGAQW FSMKRQHAVV TVADNLYYSK FRDYCGPGVE GNKNCIADEH YLPTFFYMLD
301: PTGIANWTVT YVDWSERKWH PRKYMPEDIT LELIKNISSI DAVSRVTSEK NGVVSWTHCM WNGIKRPCYL FGRKFHADTL DKLMELFPNY TSIV

Arabidopsis Description

At2g19160 [Source:UniProtKB/TrEMBL;Acc:Q8W460]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.