Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- golgi 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016802.1-P | Field mustard | golgi | 97.84 | 96.28 |
| CDY21023 | Canola | golgi | 97.84 | 96.28 |
| AT1G11940.1 | Thale cress | golgi | 85.95 | 83.03 |
| CDY34605 | Canola | golgi | 79.19 | 77.51 |
| CDY24895 | Canola | mitochondrion | 68.65 | 68.1 |
| CDY08638 | Canola | mitochondrion | 69.19 | 67.55 |
| VIT_10s0116g00980.t01 | Wine grape | golgi | 62.7 | 61.05 |
| Solyc02g036250.1.1 | Tomato | cytosol | 25.14 | 59.24 |
| KRH11480 | Soybean | mitochondrion | 57.57 | 56.5 |
| PGSC0003DMT400042390 | Potato | golgi | 56.49 | 55.73 |
| PGSC0003DMT400055283 | Potato | golgi | 54.86 | 54.57 |
| Solyc02g080970.2.1 | Tomato | plastid | 57.03 | 53.96 |
| CDY66259 | Canola | cytosol | 62.16 | 53.49 |
| HORVU3Hr1G065000.4 | Barley | cytosol | 45.68 | 52.32 |
| KRH36494 | Soybean | mitochondrion | 57.03 | 50.12 |
| GSMUA_Achr9P21910_001 | Banana | golgi | 51.89 | 49.74 |
| Os01t0695200-01 | Rice | plastid | 48.65 | 49.59 |
| TraesCS3A01G258700.1 | Wheat | golgi, mitochondrion, plastid | 52.43 | 49.36 |
| GSMUA_Achr3P28930_001 | Banana | golgi | 51.08 | 49.35 |
| TraesCS3D01G258800.1 | Wheat | golgi, mitochondrion, plastid | 52.16 | 48.98 |
| KXG33181 | Sorghum | golgi, mitochondrion, plastid | 50.27 | 47.57 |
| Zm00001d043768_P001 | Maize | golgi, mitochondrion, plastid | 50.27 | 47.57 |
| TraesCS3B01G291600.1 | Wheat | plastid | 52.43 | 46.86 |
| CDX69574 | Canola | mitochondrion | 44.86 | 45.36 |
| CDY09869 | Canola | mitochondrion | 44.86 | 45.36 |
| CDX80552 | Canola | cytosol | 14.86 | 35.95 |
| CDX89388 | Canola | cytosol | 20.0 | 32.46 |
| CDX73016 | Canola | mitochondrion | 30.27 | 32.28 |
| CDY31036 | Canola | golgi | 32.16 | 31.57 |
| CDX78440 | Canola | cytosol | 27.3 | 31.27 |
| CDX87842 | Canola | golgi | 32.7 | 31.11 |
| CDY51451 | Canola | golgi | 31.89 | 30.97 |
| CDY43927 | Canola | golgi | 32.43 | 30.85 |
| CDY20644 | Canola | golgi | 32.16 | 30.51 |
| CDY56916 | Canola | cytosol, golgi, plasma membrane, plastid | 31.35 | 30.45 |
| CDX94911 | Canola | golgi | 31.62 | 30.39 |
| CDX93443 | Canola | golgi | 31.35 | 30.21 |
| CDY51089 | Canola | golgi, mitochondrion | 32.16 | 30.13 |
| CDY28259 | Canola | golgi | 30.54 | 30.05 |
| CDX68738 | Canola | golgi | 30.54 | 30.05 |
| CDY49466 | Canola | cytosol | 20.81 | 29.96 |
| CDX83505 | Canola | mitochondrion | 32.16 | 29.9 |
| CDY12850 | Canola | mitochondrion | 32.16 | 29.9 |
| CDY19328 | Canola | golgi, mitochondrion | 30.54 | 29.89 |
| CDY01412 | Canola | mitochondrion | 32.16 | 29.82 |
| CDY03361 | Canola | mitochondrion | 31.62 | 29.62 |
| CDX82625 | Canola | mitochondrion | 31.62 | 29.62 |
| CDY66853 | Canola | mitochondrion | 31.62 | 29.55 |
| CDX70676 | Canola | cytosol, golgi, nucleus | 31.89 | 29.35 |
| CDX70417 | Canola | cytosol | 23.78 | 29.33 |
| CDX78674 | Canola | cytosol, golgi, plasma membrane | 31.89 | 29.28 |
| CDX97141 | Canola | golgi | 30.54 | 29.27 |
| CDX97139 | Canola | golgi | 30.54 | 29.27 |
| CDX69735 | Canola | golgi | 30.27 | 29.02 |
| CDY11878 | Canola | golgi | 29.73 | 28.28 |
| CDX88613 | Canola | golgi | 29.73 | 28.28 |
| CDY20597 | Canola | golgi | 25.95 | 28.24 |
| CDX94406 | Canola | golgi | 28.92 | 28.23 |
| CDX96026 | Canola | golgi | 30.0 | 28.03 |
| CDY42774 | Canola | mitochondrion | 28.38 | 27.7 |
| CDY03552 | Canola | golgi, mitochondrion | 30.0 | 27.68 |
| CDY30178 | Canola | mitochondrion | 30.0 | 27.61 |
| CDY46724 | Canola | mitochondrion | 30.0 | 27.54 |
| CDY25922 | Canola | golgi | 28.92 | 27.51 |
| CDY38285 | Canola | golgi | 28.92 | 27.51 |
| CDX92736 | Canola | mitochondrion | 28.11 | 27.44 |
| CDX78439 | Canola | golgi | 29.46 | 27.18 |
| CDX69465 | Canola | golgi | 29.73 | 27.16 |
| CDX88209 | Canola | golgi | 25.68 | 27.14 |
| CDX97140 | Canola | golgi | 30.0 | 27.07 |
| CDY44904 | Canola | golgi | 30.0 | 27.07 |
| CDX96025 | Canola | golgi, vacuole | 30.27 | 26.92 |
| CDX81507 | Canola | golgi | 29.73 | 26.83 |
| CDY59035 | Canola | golgi | 30.0 | 26.37 |
| CDX70416 | Canola | golgi | 28.92 | 24.49 |
| CDY70337 | Canola | golgi | 24.59 | 24.4 |
| CDY66012 | Canola | mitochondrion | 24.05 | 24.38 |
| CDY26504 | Canola | cytosol | 10.0 | 24.34 |
| CDY57290 | Canola | cytosol | 22.43 | 23.99 |
| CDY14193 | Canola | mitochondrion | 30.27 | 21.37 |
| CDX97918 | Canola | golgi | 28.65 | 16.8 |
| CDX73017 | Canola | cytosol | 0.27 | 7.14 |
Protein Annotations
| EnsemblPlants:CDY31228 | EnsemblPlantsGene:GSBRNA2T00047361001 | GO:A0A078H302 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0008375 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 |
| PANTHER:PTHR31042:SF2 | PFAM:PF02485 | ProteinID:CDY31228 | ProteinID:CDY31228.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EB636B | UniProt:A0A078H302 | MapMan:35.1 | : | : | : |
Description
BnaC08g15230DBnaC08g15230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H302]
Coordinates
chrLK032269:-:99193..101879
Molecular Weight (calculated)
42847.5 Da
IEP (calculated)
9.556
GRAVY (calculated)
-0.191
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRKPASRRG VVWLGWKLVI AFSVSLCLLA LLRIQLQYRS VATLAPPLSV ALRDYSGDRP KVAFLFLARR DLPLDFLWDS FFKGVDQANY SVYVHSVPGF
101: VFNEETTRSQ YFYNRQLNNS IKVIWGESSM IAAERLLFAS ALEDLSNQRF VLLSDRCAPL YDFGYIYRYV ISSPRSFVDS FLHTKETRYS VNMSSVIPEE
201: KWRKGSQWIS VIRSHAEVIV NDGIVFPVFK KFCKRAPPLG SQEAWLFFRQ NRRNCIPDEH YVQTLLTMCG LENEMERRTL TYTVWNVSGS KYETQTWHPV
301: TFTFENSGPG QIKEIKKIDH VYYETESRTE WCKADSKPVP CFLFARKFTE GAAMRLVKEG LIGSSKNITL
101: VFNEETTRSQ YFYNRQLNNS IKVIWGESSM IAAERLLFAS ALEDLSNQRF VLLSDRCAPL YDFGYIYRYV ISSPRSFVDS FLHTKETRYS VNMSSVIPEE
201: KWRKGSQWIS VIRSHAEVIV NDGIVFPVFK KFCKRAPPLG SQEAWLFFRQ NRRNCIPDEH YVQTLLTMCG LENEMERRTL TYTVWNVSGS KYETQTWHPV
301: TFTFENSGPG QIKEIKKIDH VYYETESRTE WCKADSKPVP CFLFARKFTE GAAMRLVKEG LIGSSKNITL
001: MTKKSQPQIP PPLSRRGGVV WLGWKLVIAF SVALCLLALL RIQLQYNSFT TLSFPLSVAR SQTPLHKYSG DRPKLAFLFL ARRDLPLDFM WDRFFKGVDH
101: ANFSIYIHSV PGFVFNEETT RSQYFYNRQL NNSIKVVWGE SSMIEAERLL LASALEDHSN QRFVLLSDRC APLYDFGYIY KYLISSPRSF VDSFLHTKET
201: RYSVKMSPVI PEEKWRKGSQ WIALIRSHAE VIVNDGIVFP VFKEFCKRCP PLGTNEAWLF LKQKRRNCIP DEHYVQTLLT MQGLESEMER RTVTYTVWNV
301: SGTKYEAKSW HPVTFTLENS GPEEIKEIKK IDHVYYESES RTEWCKADSK PVPCFLFARK FTNEAAMRIV SEGLIGSSAN KTL
101: ANFSIYIHSV PGFVFNEETT RSQYFYNRQL NNSIKVVWGE SSMIEAERLL LASALEDHSN QRFVLLSDRC APLYDFGYIY KYLISSPRSF VDSFLHTKET
201: RYSVKMSPVI PEEKWRKGSQ WIALIRSHAE VIVNDGIVFP VFKEFCKRCP PLGTNEAWLF LKQKRRNCIP DEHYVQTLLT MQGLESEMER RTVTYTVWNV
301: SGTKYEAKSW HPVTFTLENS GPEEIKEIKK IDHVYYESES RTEWCKADSK PVPCFLFARK FTNEAAMRIV SEGLIGSSAN KTL
Arabidopsis Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYH0]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.