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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • cytosol 2
  • golgi 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:cytosol, golgi
BaCelLo:cytosol
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX97139 Canola golgi 99.48 99.48
CDX69735 Canola golgi 96.11 96.11
Bra008941.1-P Field mustard golgi 95.85 95.85
CDX97140 Canola golgi 97.15 91.46
AT5G11730.1 Thale cress golgi 88.6 88.6
CDX78440 Canola cytosol 69.95 83.59
CDX78439 Canola golgi 83.68 80.55
CDX70417 Canola cytosol 61.4 79.0
CDX80552 Canola cytosol 29.79 75.16
CDX70416 Canola golgi 83.42 73.68
CDX88209 Canola golgi 65.54 72.29
EER93518 Sorghum golgi, plasma membrane, plastid 61.4 61.4
GSMUA_Achr1P14240_001 Banana golgi 56.22 60.61
GSMUA_Achr3P25730_001 Banana golgi 55.7 59.89
Zm00001d033892_P001 Maize endoplasmic reticulum, golgi, plasma membrane 56.22 59.45
TraesCS4A01G253400.1 Wheat golgi, plasma membrane, plastid 60.1 59.34
TraesCS4D01G061000.1 Wheat golgi, plasma membrane, plastid 59.84 58.93
TraesCS4B01G062000.1 Wheat golgi, plasma membrane, plastid 59.59 58.67
HORVU4Hr1G010270.2 Barley golgi, peroxisome 60.1 58.0
CDY51451 Canola golgi 56.48 57.22
EER93516 Sorghum golgi 56.22 57.11
CDY43927 Canola golgi 57.25 56.81
EER93517 Sorghum golgi, mitochondrion, plasma membrane 59.07 56.72
CDX87842 Canola golgi 56.74 56.3
CDY56916 Canola cytosol, golgi, plasma membrane, plastid 54.92 55.64
Zm00001d033890_P001 Maize golgi 60.62 55.58
Zm00001d033891_P001 Maize cytosol, golgi, plasma membrane 57.77 55.34
Os03t0731050-00 Rice plastid 58.55 52.8
CDY31036 Canola golgi 46.11 47.21
CDX73016 Canola mitochondrion 42.23 46.97
CDX93443 Canola golgi 46.11 46.35
CDX94911 Canola golgi 46.11 46.23
CDY20644 Canola golgi 45.85 45.38
CDY19328 Canola golgi, mitochondrion 44.3 45.24
CDX69465 Canola golgi 46.63 44.44
CDX96025 Canola golgi, vacuole 47.67 44.23
CDX70676 Canola cytosol, golgi, nucleus 45.85 44.03
CDX78674 Canola cytosol, golgi, plasma membrane 45.85 43.92
CDY44904 Canola golgi 46.63 43.9
CDX81507 Canola golgi 46.63 43.9
CDY59035 Canola golgi 47.15 43.23
CDY20597 Canola golgi 37.82 42.94
CDX96026 Canola golgi 42.75 41.67
CDX89388 Canola cytosol 24.61 41.67
CDY26504 Canola cytosol 16.32 41.45
CDY49466 Canola cytosol 24.87 37.35
CDX68738 Canola golgi 35.75 36.7
CDY28259 Canola golgi 35.75 36.7
CDY70337 Canola golgi 34.46 35.66
CDX92736 Canola mitochondrion 34.72 35.36
CDX94406 Canola golgi 34.46 35.09
CDY42774 Canola mitochondrion 34.46 35.09
CDY11878 Canola golgi 34.97 34.7
CDX88613 Canola golgi 34.97 34.7
CDY12850 Canola mitochondrion 35.75 34.67
CDX83505 Canola mitochondrion 35.75 34.67
CDY01412 Canola mitochondrion 35.75 34.59
CDX82625 Canola mitochondrion 34.97 34.18
CDY03361 Canola mitochondrion 34.97 34.18
CDY66853 Canola mitochondrion 34.72 33.84
CDY38285 Canola golgi 33.94 33.68
CDY25922 Canola golgi 33.68 33.42
CDY46724 Canola mitochondrion 34.72 33.25
CDY03552 Canola golgi, mitochondrion 34.46 33.17
CDY51089 Canola golgi, mitochondrion 33.94 33.16
CDY30178 Canola mitochondrion 34.2 32.84
CDX69574 Canola mitochondrion 30.05 31.69
CDY57290 Canola cytosol 28.24 31.5
CDY09869 Canola mitochondrion 29.79 31.42
CDY24895 Canola mitochondrion 30.05 31.1
CDY66012 Canola mitochondrion 29.02 30.68
CDY08638 Canola mitochondrion 30.05 30.61
CDY31228 Canola golgi 29.27 30.54
CDY34605 Canola golgi 29.02 29.63
CDY21023 Canola golgi 28.76 29.52
CDX97918 Canola golgi 42.49 25.99
CDY14193 Canola mitochondrion 34.97 25.76
CDY66259 Canola cytosol 25.65 23.02
CDX73017 Canola cytosol 0.78 21.43
Protein Annotations
EnsemblPlants:CDX97141EnsemblPlantsGene:GSBRNA2T00104128001GO:A0A078E7F7GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0008375GO:GO:0016020GO:GO:0016740InterPro:Glyco_trans_14PANTHER:PTHR31042PANTHER:PTHR31042:SF54
PFAM:PF02485ProteinID:CDX97141ProteinID:CDX97141.1SEG:segTMHMM:TMhelixUniParc:UPI0004EE6ABF
MapMan:35.1:::::
Description
BnaC09g44840D
Coordinates
chrLK031897:+:871128..872546
Molecular Weight (calculated)
44374.9 Da
IEP (calculated)
9.674
GRAVY (calculated)
-0.162
Length
386 amino acids
Sequence
(BLAST)
001: MQTRVIQMED GKENGILTRT GKSKPFPAKL LLILGLFLAF ALTVFVISVS TIKYTGLQSV VTTVTSGFVT CREDEPNSLG KWIQPPAVLM HNMSDEELLW
101: RASFWPRRKE YPFQRVPKVA FMFLTKGPLP LALLWERFLK GHKGLYSVYV HPHPSFTAKF PATSVFHQRQ IPSQVAEWGR MTMCDAEKRL LANALLDISN
201: EWFVLVSESC IPLFNFTTIY SYLSRSKHSF MGAFDDPGPF GRGRYNHNME PEVPITKWRK GSQWFEINRE LAATIVKDTL YYPKFKDFCR PACYVDEHYF
301: PTMLTIEKPM ALANRSLTWV DWSRGGPHPA TFGRSDITER FFEKILDGKN CIYNGRNTSM CYLFARKFAP SALESLLHIA PKILGY
Best Arabidopsis Sequence Match ( AT5G11730.1 )
(BLAST)
001: MQNRIVQLEE GKENGITVRS GHYKGFPSKL LLLLGLFLTF SVTVFIISVS TIKYTGIQSV VTTVTSSFVP CREGEPNSLS KWIQPPAVLM HNMSDEELLW
101: RASFWPRRKE YPFKRVPKVA FMFLTKGPLP LASLWERFLK GHKGLYSVYL HPHPSFTAKF PASSVFHRRQ IPSQVAEWGR MSMCDAEKRL LANALLDVSN
201: EWFVLVSESC IPLYNFTTIY SYLSRSKHSF MGAFDDPGPF GRGRYNGNME PEVPLTKWRK GSQWFEVNRD LAATIVKDTL YYPKFKEFCR PACYVDEHYF
301: PTMLTIEKPT VLANRSLTWV DWSRGGPHPA TFGRSDITEN FFGKIFDGRN CSYNGRNTSM CYLFARKFAP SALEPLLHIA PKILGF
Arabidopsis Description
At5g11730 [Source:UniProtKB/TrEMBL;Acc:Q9LYF7]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.