Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- nucleus 2
- golgi 2
- plastid 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr3P25730_001 | Banana | golgi | 71.51 | 71.31 |
PGSC0003DMT400035937 | Potato | mitochondrion | 53.91 | 65.65 |
VIT_09s0002g02660.t01 | Wine grape | cytosol | 52.79 | 64.29 |
KRH48972 | Soybean | cytosol | 37.15 | 62.44 |
EER93518 | Sorghum | golgi, plasma membrane, plastid | 67.32 | 62.44 |
TraesCS4A01G253400.1 | Wheat | golgi, plasma membrane, plastid | 66.48 | 60.87 |
KRH13326 | Soybean | cytosol | 36.03 | 60.56 |
Zm00001d033892_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 61.73 | 60.55 |
TraesCS4B01G062000.1 | Wheat | golgi, plasma membrane, plastid | 65.36 | 59.69 |
TraesCS4D01G061000.1 | Wheat | golgi, plasma membrane, plastid | 65.36 | 59.69 |
EER93516 | Sorghum | golgi | 63.13 | 59.47 |
VIT_04s0008g00690.t01 | Wine grape | golgi, nucleus, plasma membrane, plastid | 63.69 | 59.22 |
GSMUA_Achr6P09800_001 | Banana | cytosol | 45.25 | 58.27 |
HORVU4Hr1G010270.2 | Barley | golgi, peroxisome | 65.08 | 58.25 |
GSMUA_Achr8P29190_001 | Banana | cytosol | 44.41 | 58.24 |
KRH47176 | Soybean | cytosol, golgi, plasma membrane | 62.85 | 58.14 |
Solyc08g065860.2.1 | Tomato | golgi | 61.45 | 57.74 |
Solyc03g121280.2.1 | Tomato | golgi, nucleus, plasma membrane | 61.45 | 57.14 |
Zm00001d033890_P001 | Maize | golgi | 67.04 | 57.01 |
CDX78440 | Canola | cytosol | 51.4 | 56.97 |
PGSC0003DMT400006434 | Potato | golgi, nucleus, plasma membrane | 61.17 | 56.74 |
AT5G11730.1 | Thale cress | golgi | 60.89 | 56.48 |
EER93517 | Sorghum | golgi, mitochondrion, plasma membrane | 63.41 | 56.47 |
KRH05512 | Soybean | nucleus | 60.06 | 56.43 |
CDX97139 | Canola | golgi | 60.61 | 56.22 |
CDX97141 | Canola | golgi | 60.61 | 56.22 |
KRH44223 | Soybean | cytosol, golgi, plasma membrane | 60.34 | 55.81 |
Zm00001d033891_P001 | Maize | cytosol, golgi, plasma membrane | 62.57 | 55.58 |
CDX80552 | Canola | cytosol | 23.74 | 55.56 |
KRH15500 | Soybean | nucleus | 58.66 | 55.26 |
CDX69735 | Canola | golgi | 59.5 | 55.18 |
Bra008941.1-P | Field mustard | golgi | 59.5 | 55.18 |
Bra006114.1-P | Field mustard | golgi | 55.03 | 55.03 |
CDX70417 | Canola | cytosol | 46.09 | 55.0 |
GSMUA_Achr1P04580_001 | Banana | cytosol | 45.25 | 54.73 |
Solyc06g062490.2.1 | Tomato | golgi | 56.42 | 54.59 |
GSMUA_Achr7P23520_001 | Banana | cytosol | 44.97 | 54.58 |
PGSC0003DMT400012489 | Potato | golgi | 56.7 | 54.42 |
Bra006113.1-P | Field mustard | golgi | 58.66 | 54.4 |
GSMUA_Achr8P31730_001 | Banana | cytosol | 41.62 | 54.38 |
AT5G25970.2 | Thale cress | golgi | 58.38 | 54.01 |
GSMUA_Achr1P04590_001 | Banana | cytosol | 45.53 | 53.8 |
Bra031273.1-P | Field mustard | golgi | 56.98 | 53.54 |
Bra009874.1-P | Field mustard | golgi | 57.54 | 53.37 |
CDY51451 | Canola | golgi | 56.7 | 53.28 |
CDX88209 | Canola | golgi | 51.4 | 52.57 |
AT3G21310.1 | Thale cress | golgi | 56.15 | 52.48 |
CDY56916 | Canola | cytosol, golgi, plasma membrane, plastid | 55.59 | 52.23 |
CDX78439 | Canola | golgi | 58.38 | 52.12 |
CDX97140 | Canola | golgi | 59.5 | 51.95 |
Bra030418.1-P | Field mustard | golgi | 55.31 | 50.9 |
CDX87842 | Canola | golgi | 55.31 | 50.9 |
CDY43927 | Canola | golgi | 55.31 | 50.9 |
Os03t0731050-00 | Rice | plastid | 60.06 | 50.23 |
GSMUA_Achr8P08460_001 | Banana | golgi | 50.28 | 49.59 |
AT1G51770.1 | Thale cress | golgi | 55.31 | 48.77 |
CDX70416 | Canola | golgi | 57.82 | 47.37 |
GSMUA_Achr5P01370_001 | Banana | golgi | 47.49 | 46.45 |
GSMUA_Achr8P32350_001 | Banana | golgi, mitochondrion | 48.88 | 43.97 |
GSMUA_Achr10P... | Banana | cytosol | 31.56 | 40.21 |
GSMUA_Achr7P08690_001 | Banana | endoplasmic reticulum, golgi | 32.96 | 39.86 |
GSMUA_Achr11P... | Banana | cytosol | 31.56 | 38.83 |
GSMUA_Achr5P24160_001 | Banana | mitochondrion | 34.64 | 35.33 |
GSMUA_Achr4P12520_001 | Banana | golgi | 37.99 | 34.78 |
GSMUA_Achr4P05750_001 | Banana | golgi | 36.59 | 33.5 |
GSMUA_Achr2P14170_001 | Banana | mitochondrion | 31.56 | 30.79 |
GSMUA_Achr9P21910_001 | Banana | golgi | 32.4 | 30.05 |
GSMUA_Achr3P28930_001 | Banana | golgi | 31.01 | 28.98 |
Protein Annotations
EnsemblPlants:GSMUA_Achr1P14240_001 | EnsemblPlants:GSMUA_Achr1T14240_001 | EnsemblPlantsGene:GSMUA_Achr1G14240_001 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
GO:GO:0008375 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 |
PANTHER:PTHR31042:SF54 | PFAM:PF02485 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002950E5C | UniProt:M0RZT2 |
MapMan:35.1 | : | : | : | : | : |
Description
DNA binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G14240_001]
Coordinates
chr1:-:10868387..10873561
Molecular Weight (calculated)
41251.1 Da
IEP (calculated)
9.904
GRAVY (calculated)
-0.154
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MQLRVSSYED VKESAQARAA QPRASRRLLL KVLLPLLALG VGFSVFGMYL TRLQVAAPVV AAFRPCVEKP AGLERWIQPP SDLMHSMSDE ELFWRASWVP
101: LVKKYPFKWV PKVAFMFLTR GPLPLSPLWE RFFRGNEGRY SIYVHTHPSY KINFTSDSVF FKRQIPSKVS EWGQMSMCDA ERRLLANALL DLSNERFVLL
201: SESCIPLSNF NITYQYLIRS RYSFVGLIDD PGPYGRGRYN PNMAPEVNID QWRKASQWFE VNRKLALSIV KDATYYPKFK RFCKPHCYVD EHYFPTMLFI
301: ESANLLANRS ITWKILGGQN CSYNNQPSSL CHLFARKFAP STLEPLLQLA PTLLGFGS
101: LVKKYPFKWV PKVAFMFLTR GPLPLSPLWE RFFRGNEGRY SIYVHTHPSY KINFTSDSVF FKRQIPSKVS EWGQMSMCDA ERRLLANALL DLSNERFVLL
201: SESCIPLSNF NITYQYLIRS RYSFVGLIDD PGPYGRGRYN PNMAPEVNID QWRKASQWFE VNRKLALSIV KDATYYPKFK RFCKPHCYVD EHYFPTMLFI
301: ESANLLANRS ITWKILGGQN CSYNNQPSSL CHLFARKFAP STLEPLLQLA PTLLGFGS
001: MQNRIVQLEE GKENGITVRS GHYKGFPSKL LLLLGLFLTF SVTVFIISVS TIKYTGIQSV VTTVTSSFVP CREGEPNSLS KWIQPPAVLM HNMSDEELLW
101: RASFWPRRKE YPFKRVPKVA FMFLTKGPLP LASLWERFLK GHKGLYSVYL HPHPSFTAKF PASSVFHRRQ IPSQVAEWGR MSMCDAEKRL LANALLDVSN
201: EWFVLVSESC IPLYNFTTIY SYLSRSKHSF MGAFDDPGPF GRGRYNGNME PEVPLTKWRK GSQWFEVNRD LAATIVKDTL YYPKFKEFCR PACYVDEHYF
301: PTMLTIEKPT VLANRSLTWV DWSRGGPHPA TFGRSDITEN FFGKIFDGRN CSYNGRNTSM CYLFARKFAP SALEPLLHIA PKILGF
101: RASFWPRRKE YPFKRVPKVA FMFLTKGPLP LASLWERFLK GHKGLYSVYL HPHPSFTAKF PASSVFHRRQ IPSQVAEWGR MSMCDAEKRL LANALLDVSN
201: EWFVLVSESC IPLYNFTTIY SYLSRSKHSF MGAFDDPGPF GRGRYNGNME PEVPLTKWRK GSQWFEVNRD LAATIVKDTL YYPKFKEFCR PACYVDEHYF
301: PTMLTIEKPT VLANRSLTWV DWSRGGPHPA TFGRSDITEN FFGKIFDGRN CSYNGRNTSM CYLFARKFAP SALEPLLHIA PKILGF
Arabidopsis Description
At5g11730 [Source:UniProtKB/TrEMBL;Acc:Q9LYF7]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.