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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX78440 Canola cytosol 86.0 79.88
AT5G11730.1 Thale cress golgi 82.0 63.73
CDX97141 Canola golgi 79.0 61.4
CDX69735 Canola golgi 79.0 61.4
CDX97139 Canola golgi 79.0 61.4
CDX78439 Canola golgi 79.33 59.35
CDX97140 Canola golgi 76.67 56.1
CDX70416 Canola golgi 79.33 54.46
CDX88209 Canola golgi 59.33 50.86
GSMUA_Achr1P14240_001 Banana golgi 55.0 46.09
EER93518 Sorghum golgi, plasma membrane, plastid 59.0 45.85
TraesCS4A01G253400.1 Wheat golgi, plasma membrane, plastid 58.33 44.76
TraesCS4D01G061000.1 Wheat golgi, plasma membrane, plastid 58.33 44.64
TraesCS4B01G062000.1 Wheat golgi, plasma membrane, plastid 57.67 44.13
Zm00001d033892_P001 Maize endoplasmic reticulum, golgi, plasma membrane 53.33 43.84
EER93517 Sorghum golgi, mitochondrion, plasma membrane 58.67 43.78
HORVU4Hr1G010270.2 Barley golgi, peroxisome 58.33 43.75
EER93516 Sorghum golgi 54.33 42.89
Zm00001d033891_P001 Maize cytosol, golgi, plasma membrane 57.33 42.68
GSMUA_Achr3P25730_001 Banana golgi 51.0 42.62
CDY51451 Canola golgi 54.0 42.52
CDY43927 Canola golgi 54.0 41.65
CDY56916 Canola cytosol, golgi, plasma membrane, plastid 52.33 41.21
CDX87842 Canola golgi 53.33 41.13
Zm00001d033890_P001 Maize golgi 57.67 41.09
CDX80552 Canola cytosol 20.33 39.87
Os03t0731050-00 Rice plastid 56.67 39.72
CDX73016 Canola mitochondrion 44.0 38.04
CDY31036 Canola golgi 45.0 35.81
CDX94911 Canola golgi 45.67 35.58
CDX70676 Canola cytosol, golgi, nucleus 47.0 35.07
CDX93443 Canola golgi 44.67 34.9
CDX78674 Canola cytosol, golgi, plasma membrane 46.67 34.74
CDY19328 Canola golgi, mitochondrion 43.67 34.66
CDY20644 Canola golgi 45.0 34.62
CDX69465 Canola golgi 46.33 34.32
CDX96026 Canola golgi 45.0 34.09
CDY44904 Canola golgi 46.33 33.9
CDX81507 Canola golgi 46.0 33.66
CDX96025 Canola golgi, vacuole 46.67 33.65
CDY59035 Canola golgi 46.33 33.02
CDY20597 Canola golgi 36.33 32.06
CDX92736 Canola mitochondrion 35.67 28.23
CDX89388 Canola cytosol 21.33 28.07
CDX88613 Canola golgi 36.33 28.02
CDY11878 Canola golgi 36.33 28.02
CDY42774 Canola mitochondrion 35.33 27.97
CDY46724 Canola mitochondrion 37.33 27.79
CDX94406 Canola golgi 35.0 27.7
CDX68738 Canola golgi 34.67 27.66
CDY28259 Canola golgi 34.67 27.66
CDY49466 Canola cytosol 23.67 27.63
CDX83505 Canola mitochondrion 36.33 27.39
CDY12850 Canola mitochondrion 36.33 27.39
CDY30178 Canola mitochondrion 36.67 27.36
CDY70337 Canola golgi 34.0 27.35
CDY01412 Canola mitochondrion 36.33 27.32
CDY38285 Canola golgi 35.33 27.25
CDY25922 Canola golgi 35.0 26.99
CDX82625 Canola mitochondrion 35.33 26.84
CDY03361 Canola mitochondrion 35.33 26.84
CDY03552 Canola golgi, mitochondrion 35.67 26.68
CDY66853 Canola mitochondrion 35.0 26.52
CDY51089 Canola golgi, mitochondrion 34.67 26.33
CDY57290 Canola cytosol 30.0 26.01
CDY08638 Canola mitochondrion 31.67 25.07
CDY24895 Canola mitochondrion 31.0 24.93
CDY34605 Canola golgi 31.33 24.87
CDX69574 Canola mitochondrion 30.33 24.86
CDY09869 Canola mitochondrion 30.0 24.59
CDY66012 Canola mitochondrion 29.33 24.11
CDY31228 Canola golgi 29.33 23.78
CDY26504 Canola cytosol 11.67 23.03
CDY21023 Canola golgi 28.67 22.87
CDX73017 Canola cytosol 1.0 21.43
CDY14193 Canola mitochondrion 36.33 20.8
CDX97918 Canola golgi 43.0 20.44
CDY66259 Canola cytosol 25.33 17.67
Protein Annotations
EnsemblPlants:CDX70417EnsemblPlantsGene:GSBRNA2T00140225001GO:A0A078C0T7GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0008375GO:GO:0016020GO:GO:0016740InterPro:Glyco_trans_14PANTHER:PTHR31042PANTHER:PTHR31042:SF54
PFAM:PF02485ProteinID:CDX70417ProteinID:CDX70417.1SEG:segUniParc:UPI0004EF4120MapMan:35.1
Description
BnaC03g05010D
Coordinates
chrLK031791:+:336306..337533
Molecular Weight (calculated)
34910.1 Da
IEP (calculated)
8.327
GRAVY (calculated)
-0.236
Length
300 amino acids
Sequence
(BLAST)
001: MQSMVVQLEE GKENGISVRT EHVVTTVTSS FVPRREEEPD GLSKWIQPHA VLMHNMSDEE LLWRASFWPR RKGYPFKRVP KIAFMFLTRG PLPLASLWER
101: FFKGHNGLYS VYIHPHPSFT SKFPADSVFY QRQIPSQLAK WGRMTMCEAE RRLLANALLD ISNEWFVLVS ESCIHLFNFT TIYTYLSQSK HSFMDAFDDP
201: GPFRRGRYNE RMEPEVPIAK WRKGSQWFEV DRDLAATIVR DTLYHPATFG ESDITENFFQ KIFDGVNCTY NGRLTLLCVI FLQGSLLLPL LHISPKILGF
Best Arabidopsis Sequence Match ( AT3G21310.3 )
(BLAST)
001: MGMEEGIKDN AASAPNSRPT NQLKALLPMR VLQVFLLFFV LVLGISVISM HMIKYLKIQT LAPSTLISTY DERITLESLI KPPLNGWHSM NDSELLWRAS
101: MEPRILDYPF KRVPKMAFMF LTKGPLPFAP LWERFFKGHE GFYSIYVHTL PNYRSDFPSS SVFYRRQIPS QHVAWGEMSM CDAERRLLAN ALLDISNEWF
201: VLLSEACIPL RGFNFVYRYV SRSRYSFMGS VDEDGPYGRG RYSYAMGPEV SLNEWRKGSQ WFEINRALAV DIVEDMVYYN KFKEFCRPPC YVDEHYFPTM
301: LSIGYPDFLA NRTLTWTDWS RGGAHPATFG KADITEKFIK KLSRGKACFY NDQPSQVCYL FARKFAPSAL KPLLKLAPKV LGF
Arabidopsis Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:TAIR;Acc:AT3G21310]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.