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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • plastid 3
  • mitochondrion 1
  • golgi 4
  • extracellular 2
  • plasma membrane 2
  • endoplasmic reticulum 2
  • vacuole 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:plastid
Predotar:secretory
PProwler:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033941.1-P Field mustard golgi 100.0 100.0
CDX81507 Canola golgi 97.07 97.07
CDX96025 Canola golgi, vacuole 87.8 86.54
CDY59035 Canola golgi 87.32 85.04
AT1G68390.1 Thale cress plastid 80.49 80.88
CDX96026 Canola golgi 60.98 63.13
CDY70337 Canola golgi 50.98 56.03
CDX73016 Canola mitochondrion 42.2 49.86
CDX78440 Canola cytosol 38.54 48.92
CDY31036 Canola golgi 43.66 47.48
CDX97139 Canola golgi 44.15 46.89
CDY19328 Canola golgi, mitochondrion 43.17 46.83
CDX94911 Canola golgi 43.9 46.75
CDX97141 Canola golgi 43.9 46.63
CDX69735 Canola golgi 43.9 46.63
CDY51451 Canola golgi 43.17 46.46
CDX93443 Canola golgi 43.41 46.35
CDX70417 Canola cytosol 33.9 46.33
CDY56916 Canola cytosol, golgi, plasma membrane, plastid 42.68 45.93
CDY20644 Canola golgi 43.66 45.9
CDX80552 Canola cytosol 17.07 45.75
CDX87842 Canola golgi 43.17 45.5
CDY43927 Canola golgi 42.68 44.99
CDX70676 Canola cytosol, golgi, nucleus 43.17 44.03
CDX78439 Canola golgi 42.68 43.64
CDX97140 Canola golgi 43.41 43.41
CDX78674 Canola cytosol, golgi, plasma membrane 42.44 43.18
CDX69465 Canola golgi 42.44 42.96
CDY20597 Canola golgi 34.88 42.06
CDX88209 Canola golgi 35.61 41.71
CDX70416 Canola golgi 42.68 40.05
CDY26504 Canola cytosol 14.15 38.16
CDX89388 Canola cytosol 20.49 36.84
CDY28259 Canola golgi 33.41 36.44
CDX68738 Canola golgi 33.41 36.44
CDY49466 Canola cytosol 21.71 34.63
CDX92736 Canola mitochondrion 31.22 33.77
CDY42774 Canola mitochondrion 30.98 33.51
CDY46724 Canola mitochondrion 32.2 32.75
CDX94406 Canola golgi 30.24 32.72
CDY03552 Canola golgi, mitochondrion 31.95 32.67
CDY30178 Canola mitochondrion 31.95 32.59
CDY38285 Canola golgi 30.24 31.88
CDY12850 Canola mitochondrion 30.49 31.41
CDX83505 Canola mitochondrion 30.49 31.41
CDY25922 Canola golgi 29.76 31.36
CDX88613 Canola golgi 29.76 31.36
CDY11878 Canola golgi 29.76 31.36
CDY01412 Canola mitochondrion 30.49 31.33
CDY03361 Canola mitochondrion 30.0 31.14
CDY66853 Canola mitochondrion 30.0 31.06
CDY51089 Canola golgi, mitochondrion 29.76 30.89
CDX82625 Canola mitochondrion 29.51 30.63
CDY08638 Canola mitochondrion 28.29 30.61
CDY34605 Canola golgi 28.05 30.42
CDY21023 Canola golgi 27.8 30.32
CDY24895 Canola mitochondrion 27.56 30.29
CDX69574 Canola mitochondrion 26.83 30.05
CDY09869 Canola mitochondrion 26.83 30.05
CDY31228 Canola golgi 27.07 30.0
CDY57290 Canola cytosol 24.88 29.48
CDY66012 Canola mitochondrion 25.85 29.04
CDX97918 Canola golgi 40.73 26.47
CDY14193 Canola mitochondrion 31.95 25.0
CDY66259 Canola cytosol 22.93 21.86
CDX73017 Canola cytosol 0.49 14.29
Protein Annotations
MapMan:35.1GO:A0A078I640UniProt:A0A078I640EnsemblPlants:CDY44904ProteinID:CDY44904ProteinID:CDY44904.1
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0008375GO:GO:0016020GO:GO:0016021
GO:GO:0016740EnsemblPlantsGene:GSBRNA2T00081059001InterPro:Glyco_trans_14PFAM:PF02485PANTHER:PTHR31042PANTHER:PTHR31042:SF56
TMHMM:TMhelixUniParc:UPI00025462C2SEG:seg:::
Description
BnaA02g13780DBnaA02g13780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I640]
Coordinates
chrLK032605:-:204580..206860
Molecular Weight (calculated)
47201.9 Da
IEP (calculated)
9.479
GRAVY (calculated)
-0.284
Length
410 amino acids
Sequence
(BLAST)
001: MKNLKEQSSF LSSSSPSLVA KLLNAQYHHF LNLISFSLIL CCGIIIGILL HSSLQDISST SSLNIQRISQ LFLVSSPPPP TIPSPPPPPS KPVRVGLKGF
101: LRSPKKIMHD MEDEELLWRA SMAPKIRSYP FYRTPKVAFM FLTKGHLPLA PLWEKFFKGH EELFNIYVHS YPSNNESYPE GSVFHGRQIP SKRVDWGYVN
201: MVEAEQRLLA NALLDISNER FVLLSESCIP LFNFTTVYSY LTTSTQTHVE SYDQLGGVGR GRYSPEMKPR VQLRHWRKGS QWFELDRAMA LEIISDTTYW
301: PLFYRYCHHG CYADEHYIPT LLNIKSSLGG RNSNRTLTWV DWTNGGPHPT RFIRYEVTEE LLVKLRNGDD KNRQCYHNGE KTNVCYLFAR KFLPTALGRL
401: LRLAPSVLYF
Best Arabidopsis Sequence Match ( AT1G68390.1 )
(BLAST)
001: MKNQKDQNSS SLSSSSPSLT TKLLNAQYHH FLNLLSYSLI LCCGIIIGIL LHSSLQNFSS NSSLSIQRIS QLFIVSSLPP SPPPPPPPSP PSEPEQNGLK
101: SFIEPPEKLM HDMEDEELLW RASMAPKIKN YPFPRTPKVA FMFMTKGHLP LARLWERFFR GHEGLFTIYV HSYPSYNQSD PEDSVFRGRH IPSKRVDWGY
201: VNMVEAEQRL LANALLDISN ERFVLLSESC IPLFNFTTVY SYLINSTQTH VESYDQLGGV GRGRYSPLMQ PHVQLRHWRK GSQWIEVDRA MALEIISDRI
301: YWPLFYSYCH HGCYADEHYI PTLLNIKSSL KRRNSNRTLT WVDWSKGGPH PNRFIRHEVT AEFMENLRSG GECLYNGEET NICYLFARKF LPTALDRLLR
401: LSRTVLHF
Arabidopsis Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9M9C4]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.