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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • nucleus 1
  • golgi 4
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY20644 Canola golgi 96.55 93.33
Bra018450.1-P Field mustard golgi 100.0 93.32
CDX94911 Canola golgi 92.31 90.39
CDX93443 Canola golgi 90.72 89.06
AT1G10280.1 Thale cress golgi 90.19 82.52
GSMUA_Achr7P23520_001 Banana cytosol 55.97 71.53
GSMUA_Achr8P29190_001 Banana cytosol 46.68 64.47
VIT_12s0035g01710.t01 Wine grape golgi 63.66 63.32
KRH26270 Soybean golgi 62.86 61.88
KRH06031 Soybean golgi, plasma membrane, plastid 64.46 61.68
PGSC0003DMT400063986 Potato golgi 62.6 59.45
Solyc01g103150.2.1 Tomato golgi 62.33 59.19
GSMUA_Achr5P01370_001 Banana golgi 56.23 57.92
GSMUA_Achr8P08460_001 Banana golgi 54.91 57.02
TraesCS7D01G317600.1 Wheat cytosol, golgi, peroxisome 58.62 54.57
Os08t0110400-01 Rice cytosol, golgi, peroxisome 58.89 54.55
GSMUA_Achr8P32350_001 Banana golgi, mitochondrion 57.56 54.52
TraesCS7A01G320800.1 Wheat cytosol, golgi, peroxisome 58.36 54.32
TraesCS7B01G221700.1 Wheat cytosol, golgi, peroxisome 58.09 54.07
HORVU7Hr1G076790.5 Barley golgi 57.56 53.06
CDX80552 Canola cytosol 21.49 52.94
EES14395 Sorghum endoplasmic reticulum, golgi, plastid 57.82 52.91
Zm00001d035039_P001 Maize plasma membrane 57.56 52.42
Os04t0272400-01 Rice golgi, nucleus, peroxisome 55.97 51.21
TraesCS2D01G566600.1 Wheat cytosol, golgi, plasma membrane 55.44 50.24
TraesCS2B01G616400.1 Wheat golgi 55.7 50.24
HORVU2Hr1G127680.1 Barley cytosol, golgi, plasma membrane 54.64 49.4
TraesCSU01G137600.1 Wheat cytosol, golgi, plasma membrane 55.44 48.95
CDX78440 Canola cytosol 41.64 48.61
CDY51451 Canola golgi 48.28 47.77
CDY56916 Canola cytosol, golgi, plasma membrane, plastid 47.48 46.98
Zm00001d026711_P001 Maize cytosol, golgi, plasma membrane 53.85 46.45
CDX97141 Canola golgi 47.21 46.11
CDX97139 Canola golgi 47.21 46.11
EES11719 Sorghum golgi, mitochondrion, peroxisome 54.38 45.96
CDY43927 Canola golgi 47.21 45.76
CDX87842 Canola golgi 47.21 45.76
CDX69735 Canola golgi 46.42 45.34
CDX70417 Canola cytosol 35.81 45.0
CDX88209 Canola golgi 41.11 44.29
CDX96025 Canola golgi, vacuole 48.81 44.23
CDY19328 Canola golgi, mitochondrion 44.03 43.92
CDX73016 Canola mitochondrion 40.32 43.8
CDY44904 Canola golgi 47.48 43.66
CDX97140 Canola golgi 47.21 43.41
CDX81507 Canola golgi 47.21 43.41
CDY59035 Canola golgi 48.28 43.23
CDX78439 Canola golgi 45.89 43.14
CDX96026 Canola golgi 44.83 42.68
CDX70676 Canola cytosol, golgi, nucleus 45.09 42.29
CDX78674 Canola cytosol, golgi, plasma membrane 44.3 41.44
CDX69465 Canola golgi 44.3 41.23
CDX89388 Canola cytosol 24.4 40.35
CDY20597 Canola golgi 36.34 40.29
CDY26504 Canola cytosol 16.18 40.13
CDX70416 Canola golgi 46.15 39.82
CDY70337 Canola golgi 37.67 38.07
CDY49466 Canola cytosol 25.2 36.97
CDX68738 Canola golgi 36.34 36.44
CDY28259 Canola golgi 36.34 36.44
CDY30178 Canola mitochondrion 35.54 33.33
CDX94406 Canola golgi 33.42 33.25
CDY46724 Canola mitochondrion 35.28 33.0
CDY11878 Canola golgi 33.95 32.9
CDX88613 Canola golgi 33.95 32.9
CDX92736 Canola mitochondrion 32.89 32.72
CDY51089 Canola golgi, mitochondrion 34.22 32.66
CDX82625 Canola mitochondrion 34.22 32.66
CDY42774 Canola mitochondrion 32.63 32.45
CDY24895 Canola mitochondrion 31.83 32.17
CDY31228 Canola golgi 31.57 32.16
CDY38285 Canola golgi 33.16 32.13
CDY34605 Canola golgi 32.1 32.01
CDY08638 Canola mitochondrion 32.1 31.93
CDY25922 Canola golgi 32.89 31.88
CDY03552 Canola golgi, mitochondrion 33.69 31.67
CDY66853 Canola mitochondrion 33.16 31.57
CDY57290 Canola cytosol 28.91 31.5
CDX69574 Canola mitochondrion 30.5 31.42
CDY03361 Canola mitochondrion 32.89 31.39
CDY21023 Canola golgi 31.3 31.38
CDY09869 Canola mitochondrion 30.24 31.15
CDY12850 Canola mitochondrion 32.63 30.9
CDX83505 Canola mitochondrion 32.63 30.9
CDY01412 Canola mitochondrion 32.63 30.83
CDY66012 Canola mitochondrion 29.44 30.41
CDX97918 Canola golgi 41.64 24.88
CDY14193 Canola mitochondrion 34.22 24.62
CDY66259 Canola cytosol 27.85 24.42
CDX73017 Canola cytosol 0.53 14.29
Protein Annotations
EnsemblPlants:CDY31036EnsemblPlantsGene:GSBRNA2T00047108001GO:A0A078GZZ1GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0008375GO:GO:0016020GO:GO:0016021GO:GO:0016740InterPro:Glyco_trans_14PANTHER:PTHR31042
PANTHER:PTHR31042:SF3PFAM:PF02485ProteinID:CDY31036ProteinID:CDY31036.1TMHMM:TMhelixUniParc:UPI0004EDDBDA
UniProt:A0A078GZZ1MapMan:35.1::::
Description
BnaA08g25860DBnaA08g25860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZZ1]
Coordinates
chrLK032267:+:5760..7957
Molecular Weight (calculated)
43207.6 Da
IEP (calculated)
7.548
GRAVY (calculated)
-0.210
Length
377 amino acids
Sequence
(BLAST)
001: MARGRAGEKE EHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP QMLSSSASVQ TDEIRDCWSV DGFVRPEEVR HGMSDDELFW RASMVPVKEE
101: YPYDRVPKVA FMFLTRGALP MLPLWEKFFR GNEKFLSVYV HTPPGYDMNV SSDSPFYNRQ VPSQKVAWGS PLLTDAEKRL LANALLDFSN ERFVLLSESC
201: VPVYNFTTVY SYLINSAYSF VDSYDEPTRY GRGRYSRKML PDIKLHHWRK GSQWFEVNRK IAIYIISDSK YYSLFKKFCR PACYPDEHYI PTLLNMFHGS
301: VNANRSVTWV DWSIGGPHPA TYGADNITEG FLQSIRKNDT DCLYNEEPTS LCFLFARKFA PSALAPLMNL SSTVMGF
Best Arabidopsis Sequence Match ( AT1G10280.1 )
(BLAST)
001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF
Arabidopsis Description
At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.