CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49466	Canola	cytosol	79.82	70.82
Bra013927.1-P	Field mustard	golgi, plastid	94.3	58.74
CDX94406	Canola	golgi	97.37	58.58
CDY42774	Canola	mitochondrion	94.3	56.73
CDX92736	Canola	mitochondrion	94.3	56.73
AT4G25870.1	Thale cress	cytosol, golgi, mitochondrion, plastid	93.42	54.76
CDY66012	Canola	mitochondrion	81.14	50.68
CDY25922	Canola	golgi	83.77	49.1
CDY38285	Canola	golgi	83.33	48.84
CDX88613	Canola	golgi	81.14	47.56
CDY11878	Canola	golgi	80.7	47.3
CDY57290	Canola	cytosol	70.61	46.53
HORVU2Hr1G100480.3	Barley	cytosol	58.33	40.92
CDY30178	Canola	mitochondrion	69.74	39.55
CDY03552	Canola	golgi, mitochondrion	69.3	39.4
CDX80552	Canola	cytosol	26.32	39.22
CDY46724	Canola	mitochondrion	69.3	39.21
CDY03361	Canola	mitochondrion	67.11	38.73
Zm00001d024348_P002	Maize	mitochondrion	62.72	38.65
CDY66853	Canola	mitochondrion	66.67	38.38
CDX83505	Canola	mitochondrion	65.35	37.44
CDY12850	Canola	mitochondrion	65.35	37.44
CDY01412	Canola	mitochondrion	65.35	37.34
KXG24737	Sorghum	golgi	62.72	37.34
KRH19073	Soybean	golgi	64.04	37.15
Solyc07g008940.2.1	Tomato	golgi	64.04	37.15
PGSC0003DMT400073984	Potato	golgi	63.6	36.9
VIT_11s0103g00490.t01	Wine grape	golgi, plastid	64.91	36.72
CDY51089	Canola	golgi, mitochondrion	63.16	36.46
CDX82625	Canola	mitochondrion	62.28	35.95
CDY28259	Canola	golgi	59.21	35.9
CDX68738	Canola	golgi	59.21	35.9
Zm00001d026261_P001	Maize	golgi, mitochondrion	59.65	35.51
EES12818	Sorghum	golgi	59.65	35.14
KRH02808	Soybean	golgi	64.47	35.0
TraesCS2B01G452200.4	Wheat	mitochondrion	58.33	35.0
TraesCS2D01G428700.2	Wheat	mitochondrion	58.33	35.0
Zm00001d002382_P002	Maize	golgi, mitochondrion	58.33	34.37
TraesCS2A01G430900.2	Wheat	mitochondrion	57.46	33.94
Os08t0225400-01	Rice	cytosol, golgi	59.65	32.93
CDY14193	Canola	mitochondrion	69.74	30.34
CDY26504	Canola	cytosol	18.42	27.63
CDX78440	Canola	cytosol	36.84	26.01
CDX73016	Canola	mitochondrion	38.16	25.07
CDX69735	Canola	golgi	42.11	24.87
CDX97139	Canola	golgi	41.67	24.61
CDX97141	Canola	golgi	41.67	24.61
CDY31036	Canola	golgi	40.35	24.4
CDX93443	Canola	golgi	40.35	23.96
CDX78439	Canola	golgi	42.11	23.94
CDY20644	Canola	golgi	40.79	23.85
CDX94911	Canola	golgi	39.91	23.64
CDY43927	Canola	golgi	39.91	23.39
CDX87842	Canola	golgi	39.47	23.14
CDY19328	Canola	golgi, mitochondrion	38.16	23.02
CDX97140	Canola	golgi	41.23	22.93
CDY51451	Canola	golgi	37.72	22.57
CDX70676	Canola	cytosol, golgi, nucleus	39.47	22.39
CDX78674	Canola	cytosol, golgi, plasma membrane	39.47	22.33
CDY56916	Canola	cytosol, golgi, plasma membrane, plastid	37.28	22.31
CDX69465	Canola	golgi	39.47	22.22
CDX70416	Canola	golgi	42.54	22.2
CDY24895	Canola	mitochondrion	35.09	21.45
CDY70337	Canola	golgi	35.09	21.45
CDX70417	Canola	cytosol	28.07	21.33
CDX69574	Canola	mitochondrion	34.21	21.31
CDX96025	Canola	golgi, vacuole	38.6	21.15
CDY08638	Canola	mitochondrion	35.09	21.11
CDY09869	Canola	mitochondrion	33.77	21.04
CDY59035	Canola	golgi	38.6	20.9
CDX81507	Canola	golgi	37.28	20.73
CDY20597	Canola	golgi	30.7	20.59
CDX88209	Canola	golgi	31.58	20.57
CDY44904	Canola	golgi	36.84	20.49
CDX96026	Canola	golgi	35.53	20.45
CDY34605	Canola	golgi	33.33	20.11
CDY31228	Canola	golgi	32.46	20.0
CDY21023	Canola	golgi	32.46	19.68
CDY66259	Canola	cytosol	32.46	17.21
CDX97918	Canola	golgi	35.53	12.84
CDX73017	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDX89388	EnsemblPlantsGene:GSBRNA2T00149622001	GO:A0A078DQ95	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF1
PFAM:PF02485	ProteinID:CDX89388	ProteinID:CDX89388.1	UniParc:UPI0004EDEF07	MapMan:35.1	:

Description

BnaA01g15050D

Coordinates

chrLK031858:+:1291418..1292828

Molecular Weight (calculated)

26483.2 Da

IEP (calculated)

5.671

GRAVY (calculated)

-0.409

Length

228 amino acids

Sequence
(BLAST)

001: MVDAEKRLLV NALEDPDNQH FVLLSESCIP LHTFDYTYRY LLHSNVSFIE SFVDPGPHGT GRHMEHMLPE IAKEDFRKGA QWFTMKRQHA IIVMADGLYY
101: SKFREYCGPG IEADKNCIAD EHYLPTFFSM LDPMGISNWS VTYVDWSERR WHPKTYTANE ISLEFMKNVT SEEMSTHVTS VGEHGDELHW PCTWNGITRP
201: CYLFARKFHP DALDTLVNLF PNYTSTAS

Best Arabidopsis Sequence Match ( AT4G25870.1 )
(BLAST)

001: MGETQKILQG PRHHTSLKKP LWVVLTVSVT SMLLICTHMY PKHGKSSSCH GLYSTRGCED ALSKWLPVHV RKFTDEEIAA RAVVRDILRT PPFITNNSKI
101: AFLFLTPGTL PFEKLWDEFF KGHEGKFSIY IHPSKERPVH ISRHFSDREI HSDEVTWGRI SMVDAEKRLL VSALEDPDNQ HFVLVSESCI PLHTFDYTYR
201: YLLYSNVSFI ESFVDPGPHG TGRHMEHMLP EIAKEDFRKG AQWFTMKRQH AIIVMADGLY YSKFREYCGP GIEADKNCIA DEHYLPTFFN MIDPMGISNW
301: SVTFVDWSER RWHPKTYGGN EISLEFMKNV TSEDMSVHVT SVGKHGDELH WPCTWNGIKR PCYLFARKFH PDTLDTLVNL FPNYTNTAV

Arabidopsis Description

At4g25870 [Source:UniProtKB/TrEMBL;Acc:Q9SVZ8]
SUBAcon: [mitochondrion,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.