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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • plastid 2
  • golgi 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:cytosol, golgi, mitochondrion, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:golgi
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX88613 Canola golgi 98.97 98.97
CDY38285 Canola golgi 94.09 94.09
CDY25922 Canola golgi 93.83 93.83
AT5G57270.5 Thale cress golgi 90.75 90.98
CDX89388 Canola cytosol 47.3 80.7
CDY42774 Canola mitochondrion 72.75 74.67
CDX94406 Canola golgi 72.75 74.67
CDX92736 Canola mitochondrion 71.72 73.61
CDY49466 Canola cytosol 47.81 72.37
CDY66012 Canola mitochondrion 63.5 67.67
CDY57290 Canola cytosol 55.27 62.14
CDY03361 Canola mitochondrion 61.7 60.76
HORVU2Hr1G100480.3 Barley cytosol 50.64 60.62
KRH19073 Soybean golgi 60.93 60.31
CDY46724 Canola mitochondrion 62.47 60.3
CDY30178 Canola mitochondrion 62.21 60.2
CDY66853 Canola mitochondrion 61.18 60.1
CDY03552 Canola golgi, mitochondrion 61.95 60.1
Solyc07g008940.2.1 Tomato golgi 59.38 58.78
PGSC0003DMT400073984 Potato golgi 58.87 58.27
VIT_11s0103g00490.t01 Wine grape golgi, plastid 60.15 58.06
CDY12850 Canola mitochondrion 59.13 57.79
CDX83505 Canola mitochondrion 59.13 57.79
CDY01412 Canola mitochondrion 59.13 57.64
Zm00001d026261_P001 Maize golgi, mitochondrion 56.56 57.44
EES12818 Sorghum golgi 55.53 55.81
KRH02808 Soybean golgi 60.15 55.71
CDX82625 Canola mitochondrion 56.56 55.7
CDY51089 Canola golgi, mitochondrion 56.3 55.44
Zm00001d024348_P002 Maize mitochondrion 52.7 55.41
TraesCS2D01G428700.2 Wheat mitochondrion 53.73 55.0
Zm00001d002382_P002 Maize golgi, mitochondrion 54.5 54.78
TraesCS2B01G452200.4 Wheat mitochondrion 53.47 54.74
KXG24737 Sorghum golgi 53.47 54.31
TraesCS2A01G430900.2 Wheat mitochondrion 53.47 53.89
CDY28259 Canola golgi 51.67 53.46
CDX68738 Canola golgi 51.67 53.46
Os08t0225400-01 Rice cytosol, golgi 52.96 49.88
CDY14193 Canola mitochondrion 62.21 46.18
CDX78440 Canola cytosol 32.9 39.63
CDX80552 Canola cytosol 15.42 39.22
CDX73016 Canola mitochondrion 32.65 36.6
CDX70417 Canola cytosol 28.02 36.33
CDX69735 Canola golgi 35.99 36.27
CDX97139 Canola golgi 34.7 34.97
CDX97141 Canola golgi 34.7 34.97
CDX78439 Canola golgi 35.99 34.91
CDX93443 Canola golgi 33.68 34.11
CDX94911 Canola golgi 33.68 34.03
CDX88209 Canola golgi 30.59 34.0
CDX78674 Canola cytosol, golgi, plasma membrane 35.22 33.99
CDY31036 Canola golgi 32.9 33.95
CDY19328 Canola golgi, mitochondrion 32.9 33.86
CDY51451 Canola golgi 33.16 33.86
CDY43927 Canola golgi 33.68 33.68
CDX87842 Canola golgi 33.42 33.42
CDY20644 Canola golgi 33.16 33.08
CDX70676 Canola cytosol, golgi, nucleus 33.93 32.84
CDY56916 Canola cytosol, golgi, plasma membrane, plastid 32.13 32.81
CDX97140 Canola golgi 34.45 32.68
CDX69465 Canola golgi 33.42 32.1
CDY20597 Canola golgi 27.76 31.76
CDX69574 Canola mitochondrion 29.82 31.69
CDY09869 Canola mitochondrion 29.31 31.15
CDY26504 Canola cytosol 12.08 30.92
CDX70416 Canola golgi 34.7 30.89
CDY24895 Canola mitochondrion 29.56 30.83
CDX96026 Canola golgi 31.36 30.81
CDY08638 Canola mitochondrion 29.82 30.61
CDX96025 Canola golgi, vacuole 32.39 30.29
CDY21023 Canola golgi 29.05 30.05
CDY59035 Canola golgi 32.39 29.93
CDX81507 Canola golgi 31.36 29.76
CDY44904 Canola golgi 31.36 29.76
CDY31228 Canola golgi 28.28 29.73
CDY34605 Canola golgi 28.28 29.1
CDY70337 Canola golgi 25.45 26.54
CDY66259 Canola cytosol 24.16 21.86
CDX97918 Canola golgi 32.39 19.97
CDX73017 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:CDY11878EnsemblPlantsGene:GSBRNA2T00060712001GO:A0A078FIE5GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0008375GO:GO:0016020GO:GO:0016021GO:GO:0016740InterPro:Glyco_trans_14PANTHER:PTHR31042
PANTHER:PTHR31042:SF1PFAM:PF02485ProteinID:CDY11878ProteinID:CDY11878.1SEG:segTMHMM:TMhelix
UniParc:UPI0004EBF4E2UniProt:A0A078FIE5MapMan:35.1:::
Description
BnaC03g13040DBnaC03g13040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FIE5]
Coordinates
chrLK032015:+:196632..199180
Molecular Weight (calculated)
45239.5 Da
IEP (calculated)
9.544
GRAVY (calculated)
-0.366
Length
389 amino acids
Sequence
(BLAST)
001: MGESQNLHLP LRNRSSLKKP LLIVLLVCTT SILLVCTYMY PQHKVKSLAC EGLSTRGCQA ALSGWLDVHV RKHTDEEVAA RVVIRDILRT PPALTSKSKI
101: AFMFLTPGTL PFEKLWDKFL QGQEGRFSVY IHPSRLRPVH ISRHFSDREI HSDQVTWGRI SMVDAERRLL ANALEDPDNQ HFVLLSESCI PLHTFDYTYR
201: YLMQGNVSFI DSFEDRGPHG TGRHMDHMLP EIPRQDFRKG AQWFTMKRQH ALIVMADNLY YSKFRQFCRP GVEANKNCIA DEHYLPTFFH MLDPGGISNW
301: SVTYVDWSER RWHPKTYRAR DISLKFLKNI TSDDVSVHVT SVGKRGEELR WPCTWNGIRR PCYLFARKFH SDSVNKLVRL FPNYTSTVV
Best Arabidopsis Sequence Match ( AT5G57270.2 )
(BLAST)
001: MGENLHLSPR HRSSLKKPLL IVLLVCITSV LLVITYMYPQ HNNSKSSACA GLSSRGCQAA LSGWLPVHVR KFTDEEVAAR VVIKDILRLP PALTAKSKIA
101: FMFLTPGTLP FEKLWDKFFQ GQEGRFSIYI HPSRLRPVHI SRHFSDREIH SDHVTWGRIS MVDAERRLLA NALEDPDNQH FVLLSESCIP LHTFDYTYRY
201: LMHANVSFID SFEDLGPHGT GRHMDHMLPE IPRQDFRKGA QWFTMKRQHA VIVMADGLYY SKFREYCRPG VEANKNCIAD EHYLPTFFHM LDPGGISNWS
301: VTYVDWSERR WHPKTYRARD VSLKLLKNIT SDDMSVHVTS VGKRGEELRW PCTWKGIRRP CYLFARKLHS DALYKLVRLF PNYTSTVV
Arabidopsis Description
At5g57270 [Source:UniProtKB/TrEMBL;Acc:Q8W4D1]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.