CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY03552	Canola	golgi, mitochondrion	75.76	99.0
AT4G30060.1	Thale cress	golgi	69.27	90.52
CDY46724	Canola	mitochondrion	68.13	88.59
CDY30178	Canola	mitochondrion	67.56	88.06
CDY66853	Canola	mitochondrion	58.78	77.78
CDY03361	Canola	mitochondrion	58.02	76.96
CDY12850	Canola	mitochondrion	57.06	75.13
CDX83505	Canola	mitochondrion	57.06	75.13
CDY01412	Canola	mitochondrion	57.06	74.94
CDX82625	Canola	mitochondrion	55.15	73.16
CDY51089	Canola	golgi, mitochondrion	54.96	72.91
CDX89388	Canola	cytosol	30.34	69.74
KRH19073	Soybean	golgi	49.62	66.16
Solyc07g008940.2.1	Tomato	golgi	49.24	65.65
CDY49466	Canola	cytosol	31.87	64.98
PGSC0003DMT400073984	Potato	golgi	48.66	64.89
CDY38285	Canola	golgi	46.18	62.21
CDY11878	Canola	golgi	46.18	62.21
CDX88613	Canola	golgi	46.18	62.21
VIT_11s0103g00490.t01	Wine grape	golgi, plastid	47.71	62.03
CDY25922	Canola	golgi	45.99	61.95
KRH02808	Soybean	golgi	49.62	61.9
CDX94406	Canola	golgi	44.66	61.74
CDY42774	Canola	mitochondrion	43.89	60.69
CDX92736	Canola	mitochondrion	43.7	60.42
HORVU2Hr1G100480.3	Barley	cytosol	36.45	58.77
Zm00001d026261_P001	Maize	golgi, mitochondrion	41.98	57.44
EES12818	Sorghum	golgi	42.18	57.11
Zm00001d024348_P002	Maize	mitochondrion	40.27	57.03
KXG24737	Sorghum	golgi	41.6	56.92
Zm00001d002382_P002	Maize	golgi, mitochondrion	41.98	56.85
CDY66012	Canola	mitochondrion	39.31	56.44
CDY28259	Canola	golgi	40.27	56.12
CDX68738	Canola	golgi	40.27	56.12
TraesCS2D01G428700.2	Wheat	mitochondrion	40.27	55.53
TraesCS2B01G452200.4	Wheat	mitochondrion	40.08	55.26
TraesCS2A01G430900.2	Wheat	mitochondrion	39.89	54.15
Os08t0225400-01	Rice	cytosol, golgi	41.79	53.03
CDY57290	Canola	cytosol	34.16	51.73
CDX78440	Canola	cytosol	23.86	38.7
CDX73016	Canola	mitochondrion	25.19	38.04
CDX87842	Canola	golgi	27.1	36.5
CDY43927	Canola	golgi	27.1	36.5
CDX70417	Canola	cytosol	20.8	36.33
CDX80552	Canola	cytosol	10.31	35.29
CDY51451	Canola	golgi	25.57	35.17
CDX97139	Canola	golgi	25.76	34.97
CDX97141	Canola	golgi	25.76	34.97
CDX69735	Canola	golgi	25.57	34.72
CDY56916	Canola	cytosol, golgi, plasma membrane, plastid	25.19	34.65
CDY31036	Canola	golgi	24.62	34.22
CDX78674	Canola	cytosol, golgi, plasma membrane	25.95	33.75
CDX70676	Canola	cytosol, golgi, nucleus	25.76	33.58
CDX69465	Canola	golgi	25.76	33.33
CDX94911	Canola	golgi	24.43	33.25
CDY08638	Canola	mitochondrion	24.05	33.25
CDY24895	Canola	mitochondrion	23.66	33.24
CDX97140	Canola	golgi	25.95	33.17
CDX78439	Canola	golgi	25.38	33.17
CDX96026	Canola	golgi	25.0	33.08
CDX93443	Canola	golgi	24.24	33.07
CDY19328	Canola	golgi, mitochondrion	23.86	33.07
CDX69574	Canola	mitochondrion	23.09	33.06
CDY09869	Canola	mitochondrion	22.9	32.79
CDX96025	Canola	golgi, vacuole	25.95	32.69
CDY20644	Canola	golgi	24.24	32.56
CDX81507	Canola	golgi	25.19	32.2
CDY59035	Canola	golgi	25.76	32.07
CDX88209	Canola	golgi	21.37	32.0
CDY44904	Canola	golgi	25.0	31.95
CDY26504	Canola	cytosol	9.16	31.58
CDY20597	Canola	golgi	20.04	30.88
CDY34605	Canola	golgi	22.14	30.69
CDY31228	Canola	golgi	21.37	30.27
CDX70416	Canola	golgi	25.19	30.21
CDY21023	Canola	golgi	21.56	30.05
CDY70337	Canola	golgi	19.66	27.61
CDY66259	Canola	cytosol	18.7	22.79
CDX97918	Canola	golgi	23.09	19.18
CDX73017	Canola	cytosol	0.38	14.29

Protein Annotations

MapMan:35.1	GO:A0A078FPD8	UniProt:A0A078FPD8	EnsemblPlants:CDY14193	ProteinID:CDY14193	ProteinID:CDY14193.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00078755001	InterPro:Glyco_trans_14	PFAM:PF02485	PANTHER:PTHR31042	PANTHER:PTHR31042:SF1
TMHMM:TMhelix	UniParc:UPI0004EE6BF0	SEG:seg	:	:	:

Description

BnaA08g13240DBnaA08g13240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FPD8]

Coordinates

chrLK032041:+:80203..84191

Molecular Weight (calculated)

61257.2 Da

IEP (calculated)

8.493

GRAVY (calculated)

-0.437

Length

524 amino acids

Sequence
(BLAST)

001: MKAAKRWSLG NLRDMASSLP GPRHRAPSRR RGRVYIIMAL SLIAFFAVIA YMYPHHSKRA CYMISSRGCK ALADWLPPSL REYSDDEIAA RVVISEILSN
101: PPVIRKDSKI AFMFLTPGAL PFERLWDRFF QGHEGKFSVY IHASKERPVH YSRYFLNREI RSDEVVWGRI SMVDAERRLL ANALRDPTNQ QFVLLSDSCV
201: PLRSFEYIYN YLMYSNVSYV DCFDDPGQHG SGRHMNHMLP EIQKKDFRKG AQWFTMKRQH AVATMADSLY YSKFRDYCGP GIENNKNCIA DEHYLPTFFH
301: MLDPTGISNW TVTQVDWSER LCVPLRSFEY IYNYLMYSNV SYVDCFDDPG QHGSGRHMNH MLPEIQKKDF RKGAQWFTMK RQHAVATMAD SLYYSKFRDY
401: CGPGIENNKN CIADEHYLPT FFHMLDPTGI SNWTVTQVDW SERKWHPKTY MPEDVTHELL NNLTSTDTVV HVTSVGVGEE IWMPCMWNGI KRPCYLFGRK
501: FHPDTLDKLL DLFSNYTKSV SWQL

Best Arabidopsis Sequence Match ( AT2G19160.1 )
(BLAST)

001: MKAIKGWRLG KINYMQSLPG ARHRAPTRKP IWIIAVLSLI AMFVIGAYMF PHHSKAACYM FSSKGCKGLT DWLPPSLREY SDDEIAARVV ISEILSSPRV
101: IKKSSKIAFM FLTPGTLPFE KLWDLFFQGH EGKFSVYIHA SKDTPVHTSR YFLNREIRSD EVVWGRISMI DAERRLLTNA LRDPENQQFV LLSDSCVPLR
201: SFEYMYNYMM HSNVSYVDCF DDPGPHGTGR HMDHMLPEIP REDFRKGAQW FSMKRQHAVV TVADNLYYSK FRDYCGPGVE GNKNCIADEH YLPTFFYMLD
301: PTGIANWTVT YVDWSERKWH PRKYMPEDIT LELIKNISSI DAVSRVTSEK NGVVSWTHCM WNGIKRPCYL FGRKFHADTL DKLMELFPNY TSIV

Arabidopsis Description

At2g19160 [Source:UniProtKB/TrEMBL;Acc:Q8W460]
SUBAcon: [golgi,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.