Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- golgi 3
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010307.1-P | Field mustard | golgi, mitochondrion | 90.02 | 90.02 |
| CDY03552 | Canola | golgi, mitochondrion | 89.78 | 89.78 |
| CDY46724 | Canola | mitochondrion | 88.53 | 88.09 |
| Bra024111.1-P | Field mustard | mitochondrion | 81.8 | 87.47 |
| CDY30178 | Canola | mitochondrion | 87.53 | 87.31 |
| AT2G19160.1 | Thale cress | golgi, mitochondrion | 77.56 | 78.93 |
| CDY14193 | Canola | mitochondrion | 90.52 | 69.27 |
| KRH19073 | Soybean | golgi | 65.34 | 66.67 |
| Solyc07g008940.2.1 | Tomato | golgi | 63.34 | 64.63 |
| PGSC0003DMT400073984 | Potato | golgi | 62.84 | 64.12 |
| AT5G57270.5 | Thale cress | golgi | 61.35 | 63.4 |
| AT4G25870.1 | Thale cress | cytosol, golgi, mitochondrion, plastid | 61.1 | 62.98 |
| KRH02808 | Soybean | golgi | 65.34 | 62.38 |
| VIT_11s0103g00490.t01 | Wine grape | golgi, plastid | 62.59 | 62.28 |
| HORVU2Hr1G100480.3 | Barley | cytosol | 47.63 | 58.77 |
| AT4G31350.4 | Thale cress | golgi | 54.61 | 58.24 |
| EES12818 | Sorghum | golgi | 55.86 | 57.88 |
| Zm00001d026261_P001 | Maize | golgi, mitochondrion | 55.11 | 57.7 |
| KXG24737 | Sorghum | golgi | 54.61 | 57.18 |
| Zm00001d002382_P002 | Maize | golgi, mitochondrion | 55.11 | 57.11 |
| Zm00001d024348_P002 | Maize | mitochondrion | 52.62 | 57.03 |
| TraesCS2D01G428700.2 | Wheat | mitochondrion | 52.37 | 55.26 |
| TraesCS2B01G452200.4 | Wheat | mitochondrion | 52.12 | 55.0 |
| TraesCS2A01G430900.2 | Wheat | mitochondrion | 51.87 | 53.89 |
| Os08t0225400-01 | Rice | cytosol, golgi | 54.61 | 53.03 |
| AT3G21310.1 | Thale cress | golgi | 34.16 | 35.77 |
| AT5G11730.1 | Thale cress | golgi | 34.41 | 35.75 |
| AT5G25970.2 | Thale cress | golgi | 34.16 | 35.4 |
| AT1G51770.1 | Thale cress | golgi | 35.41 | 34.98 |
| AT1G73810.1 | Thale cress | golgi, nucleus, peroxisome | 35.91 | 34.45 |
| AT5G16170.1 | Thale cress | golgi | 34.16 | 33.33 |
| AT1G10880.1 | Thale cress | golgi | 31.67 | 32.9 |
| AT1G68390.1 | Thale cress | plastid | 33.42 | 32.84 |
| AT1G68380.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 31.17 | 31.89 |
| AT1G10280.1 | Thale cress | golgi | 32.67 | 31.8 |
| AT5G14550.1 | Thale cress | mitochondrion | 29.43 | 31.3 |
| AT1G62305.1 | Thale cress | golgi | 29.43 | 31.22 |
| AT1G11940.1 | Thale cress | golgi | 29.43 | 30.81 |
Protein Annotations
| MapMan:35.1 | EntrezGene:829129 | UniProt:A0A178UZ84 | ProteinID:AEE85713.1 | ProteinID:ANM66669.1 | ArrayExpress:AT4G30060 |
| EnsemblPlantsGene:AT4G30060 | RefSeq:AT4G30060 | TAIR:AT4G30060 | RefSeq:AT4G30060-TAIR-G | EnsemblPlants:AT4G30060.1 | TAIR:AT4G30060.1 |
| EMBL:AY062601 | EMBL:AY114648 | Unigene:At.27288 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0008375 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | InterPro:Glyco_trans_14 |
| EMBL:KJ138732 | RefSeq:NP_001328551.1 | RefSeq:NP_194735.2 | ProteinID:OAO97991.1 | PFAM:PF02485 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0007095 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009025 |
| PO:PO:0009030 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF1 | UniProt:Q8W4E9 |
| TMHMM:TMhelix | UniParc:UPI00000A75AF | SEG:seg | : | : | : |
Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4E9]
Coordinates
chr4:-:14688991..14692553
Molecular Weight (calculated)
46858.6 Da
IEP (calculated)
8.943
GRAVY (calculated)
-0.322
Length
401 amino acids
Sequence
(BLAST)
(BLAST)
001: MKAVKRWSIG NLADIPVSLP GARYRAPPPG RRRVWIIMVL SLITMFFIMA YMYPHHSKRA CYMISSRGCK ALADWLPPSL REYSDDEIAA RVVIREILSS
101: PPVIRKNSKI AFMFLTPGTL PFERLWDRFF LGHEGKFSVY IHASKERPVH YSRYFLNREI RSDEVVWGRI SMVDAERRLL ANALRDTSNQ QFVLLSDSCV
201: PLRSFEYIYN YLMHSNLSYV DCFDDPGQHG AGRHMNHMLP EIPKKDFRKG AQWFTMKRQH AVATMADSLY YSKFRDYCGP GIENNKNCIA DEHYLPTFFH
301: MLDPGGIANW TVTQVDWSER KWHPKTYMPE DITHELLNNL TSTDTLVHVT SVGMGEEIWM PCMWNGIQRP CYLFGRKFHP DTLDKLLDLF SNYTRSVTWN
401: L
101: PPVIRKNSKI AFMFLTPGTL PFERLWDRFF LGHEGKFSVY IHASKERPVH YSRYFLNREI RSDEVVWGRI SMVDAERRLL ANALRDTSNQ QFVLLSDSCV
201: PLRSFEYIYN YLMHSNLSYV DCFDDPGQHG AGRHMNHMLP EIPKKDFRKG AQWFTMKRQH AVATMADSLY YSKFRDYCGP GIENNKNCIA DEHYLPTFFH
301: MLDPGGIANW TVTQVDWSER KWHPKTYMPE DITHELLNNL TSTDTLVHVT SVGMGEEIWM PCMWNGIQRP CYLFGRKFHP DTLDKLLDLF SNYTRSVTWN
401: L
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.