Factsheet for Bra024111.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
golgi 3
extracellular 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
mitochondrion 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	secretory
PTS1:	peroxisome
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30178	Canola	mitochondrion	100.0	93.28
Bra010307.1-P	Field mustard	golgi, mitochondrion	88.0	82.29
AT4G30060.1	Thale cress	golgi	87.47	81.8
Bra036729.1-P	Field mustard	mitochondrion	74.93	70.96
Bra012167.1-P	Field mustard	mitochondrion	72.0	67.67
Bra038843.1-P	Field mustard	mitochondrion	69.6	65.58
KRH19073	Soybean	golgi	61.6	58.78
Bra002743.1-P	Field mustard	golgi	60.0	57.84
Solyc07g008940.2.1	Tomato	golgi	59.73	57.0
Bra013927.1-P	Field mustard	golgi, plastid	55.47	56.83
PGSC0003DMT400073984	Potato	golgi	59.2	56.49
VIT_11s0103g00490.t01	Wine grape	golgi, plastid	60.0	55.83
KRH02808	Soybean	golgi	61.87	55.24
Bra019138.1-P	Field mustard	plastid	55.2	53.08
HORVU2Hr1G100480.3	Barley	cytosol	45.07	52.0
Bra010446.1-P	Field mustard	mitochondrion	53.87	51.93
EES12818	Sorghum	golgi	53.07	51.42
Zm00001d026261_P001	Maize	golgi, mitochondrion	52.27	51.17
Bra011262.1-P	Field mustard	golgi	51.2	51.06
KXG24737	Sorghum	golgi	51.73	50.65
Zm00001d002382_P002	Maize	golgi, mitochondrion	52.27	50.65
Zm00001d024348_P002	Maize	mitochondrion	49.87	50.54
TraesCS2D01G428700.2	Wheat	mitochondrion	49.87	49.21
TraesCS2B01G452200.4	Wheat	mitochondrion	49.6	48.95
TraesCS2A01G430900.2	Wheat	mitochondrion	49.33	47.93
Os08t0225400-01	Rice	cytosol, golgi	52.27	47.46
Bra006342.1-P	Field mustard	cytosol	33.07	35.73
Bra006114.1-P	Field mustard	golgi	33.33	34.92
Bra015963.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	32.27	34.57
Bra030418.1-P	Field mustard	golgi	33.6	32.39
Bra006113.1-P	Field mustard	golgi	32.8	31.87
Bra031273.1-P	Field mustard	golgi	32.0	31.5
Bra008941.1-P	Field mustard	golgi	32.27	31.35
Bra008639.1-P	Field mustard	golgi	33.6	31.11
Bra008752.1-P	Field mustard	mitochondrion	30.13	30.87
Bra034487.1-P	Field mustard	mitochondrion	30.67	30.83
Bra019894.1-P	Field mustard	golgi	30.93	30.77
Bra009874.1-P	Field mustard	golgi	31.47	30.57
Bra018450.1-P	Field mustard	golgi	32.27	29.95
Bra004303.1-P	Field mustard	golgi, vacuole	33.07	29.81
Bra004302.1-P	Field mustard	golgi	31.2	29.55
Bra033941.1-P	Field mustard	golgi	32.27	29.51
Bra019951.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	32.27	29.23
Bra016802.1-P	Field mustard	golgi	27.47	27.39
Bra031797.1-P	Field mustard	cytosol	23.73	26.33

Protein Annotations

EnsemblPlants:Bra024111.1	EnsemblPlants:Bra024111.1-P	EnsemblPlantsGene:Bra024111	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF1	PFAM:PF02485	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002540D49	UniProt:M4E5Q7
MapMan:35.1	:	:	:	:	:

Description

AT4G30060 (E=2e-111) | unknown protein

Coordinates

chrA03:-:27539554..27541767

Molecular Weight (calculated)

43510.6 Da

IEP (calculated)

8.463

GRAVY (calculated)

-0.281

Length

375 amino acids

Sequence
(BLAST)

001: MKAAKRWSVG NLASLPGARH RAPARRRLWI IMALSLIIMT LSLITMLAIM AYMYPHHSKR ACYMISSRGC KALADWLPPS LREYSDDEIA ARVVIREIMS
101: NAPVIRRDSK IAFMFLTPGT LPFERLWDIF FQGHEGKFSV YIHASKERPV HQSHYFANRE IRSDEVVWGR ISMVDAERRL LANALRDPAN QQFVLLSESC
201: VPLRSFEYMY NYLMYSNLSY VDCFDDPGQH GSGRHMDHML PEIPKKYFRK GAQPGIENNK NCIADEHYLP TFFHMLDPGG ISNWSVTQVD WSERQWHPKT
301: YMPEDVTHEL LNNLTSADTV AHVTSVGMGE ELWMPCMWNG IKRPCFLFGR KFHPDTLDKL LDLFSNYTRS VSWHL

Best Arabidopsis Sequence Match ( AT4G30060.1 )
(BLAST)

001: MKAVKRWSIG NLADIPVSLP GARYRAPPPG RRRVWIIMVL SLITMFFIMA YMYPHHSKRA CYMISSRGCK ALADWLPPSL REYSDDEIAA RVVIREILSS
101: PPVIRKNSKI AFMFLTPGTL PFERLWDRFF LGHEGKFSVY IHASKERPVH YSRYFLNREI RSDEVVWGRI SMVDAERRLL ANALRDTSNQ QFVLLSDSCV
201: PLRSFEYIYN YLMHSNLSYV DCFDDPGQHG AGRHMNHMLP EIPKKDFRKG AQWFTMKRQH AVATMADSLY YSKFRDYCGP GIENNKNCIA DEHYLPTFFH
301: MLDPGGIANW TVTQVDWSER KWHPKTYMPE DITHELLNNL TSTDTLVHVT SVGMGEEIWM PCMWNGIQRP CYLFGRKFHP DTLDKLLDLF SNYTRSVTWN
401: L

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4E9]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.