Factsheet for Bra002743.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 4
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38285	Canola	golgi	99.49	99.49
AT5G57270.5	Thale cress	golgi	89.97	90.21
Bra013927.1-P	Field mustard	golgi, plastid	71.98	76.5
Bra019138.1-P	Field mustard	plastid	70.18	70.0
Bra010446.1-P	Field mustard	mitochondrion	69.15	69.15
HORVU2Hr1G100480.3	Barley	cytosol	51.16	61.23
Bra036729.1-P	Field mustard	mitochondrion	61.7	60.61
Bra010307.1-P	Field mustard	golgi, mitochondrion	62.21	60.35
KRH19073	Soybean	golgi	60.93	60.31
Bra024111.1-P	Field mustard	mitochondrion	57.84	60.0
Solyc07g008940.2.1	Tomato	golgi	59.38	58.78
PGSC0003DMT400073984	Potato	golgi	58.87	58.27
Bra012167.1-P	Field mustard	mitochondrion	59.64	58.15
VIT_11s0103g00490.t01	Wine grape	golgi, plastid	60.15	58.06
Zm00001d026261_P001	Maize	golgi, mitochondrion	55.53	56.4
Bra038843.1-P	Field mustard	mitochondrion	57.58	56.28
KRH02808	Soybean	golgi	60.41	55.95
EES12818	Sorghum	golgi	55.27	55.56
TraesCS2D01G428700.2	Wheat	mitochondrion	53.98	55.26
Zm00001d024348_P002	Maize	mitochondrion	52.19	54.86
Bra011262.1-P	Field mustard	golgi	52.96	54.79
Zm00001d002382_P002	Maize	golgi, mitochondrion	54.24	54.52
TraesCS2B01G452200.4	Wheat	mitochondrion	53.21	54.47
TraesCS2A01G430900.2	Wheat	mitochondrion	53.47	53.89
KXG24737	Sorghum	golgi	52.44	53.26
Os08t0225400-01	Rice	cytosol, golgi	52.44	49.39
Bra006342.1-P	Field mustard	cytosol	33.93	38.04
Bra015963.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	32.65	36.29
Bra006114.1-P	Field mustard	golgi	32.9	35.75
Bra009874.1-P	Field mustard	golgi	34.96	35.23
Bra008941.1-P	Field mustard	golgi	34.96	35.23
Bra006113.1-P	Field mustard	golgi	34.96	35.23
Bra019894.1-P	Field mustard	golgi	33.42	34.48
Bra031273.1-P	Field mustard	golgi	33.42	34.12
Bra030418.1-P	Field mustard	golgi	33.42	33.42
Bra008639.1-P	Field mustard	golgi	33.68	32.35
Bra004302.1-P	Field mustard	golgi	32.13	31.57
Bra019951.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	33.42	31.4
Bra018450.1-P	Field mustard	golgi	32.13	30.94
Bra008752.1-P	Field mustard	mitochondrion	29.05	30.87
Bra034487.1-P	Field mustard	mitochondrion	29.56	30.83
Bra004303.1-P	Field mustard	golgi, vacuole	32.13	30.05
Bra033941.1-P	Field mustard	golgi	31.62	30.0
Bra016802.1-P	Field mustard	golgi	27.76	28.72
Bra031797.1-P	Field mustard	cytosol	23.91	27.51

Protein Annotations

EnsemblPlants:Bra002743.1	EnsemblPlants:Bra002743.1-P	EnsemblPlantsGene:Bra002743	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF1	PFAM:PF02485	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002544DD4	UniProt:M4CEW1
MapMan:35.1	:	:	:	:	:

Description

AT5G57270 (E=4e-200) | unknown protein

Coordinates

chrA10:-:7907714..7909663

Molecular Weight (calculated)

45181.5 Da

IEP (calculated)

9.160

GRAVY (calculated)

-0.338

Length

389 amino acids

Sequence
(BLAST)

001: MGETQNLHLP LRTRSSLKKP LLIILLICIT SVLLICTYMY PQHSVKSPAC EGLSSRGCQA ALSGWLDVHV RKHTDEEVAA RVVIRDILRM PPALTSRSKI
101: AFMFLSPGTL PFEKLWDKFL QGQEGRFSIY IHPSRLRPVH ISRHFTDREI HSDHVTWGRI SMVDAERRLL ANALEDPDNQ HFVLLSESCI PLHTFDYTYR
201: YLIHGNVSFI DSFEDPGPHG TGRHMDHMLP EIPKQDFRKG AQWFTMKRQH ALIVMADNLY YSKFRQYCRP GVEANKNCIA DEHYLPTFFH MLDPGGISNW
301: SVTYVDWSER RWHPKTYRAR DISLKFLKNI TSDDMSVHVT SVGKRGDELH WPCTWNGIRR PCYLFARKFH SDSVNKLVKL FPNYTSTVV

Best Arabidopsis Sequence Match ( AT5G57270.2 )
(BLAST)

001: MGENLHLSPR HRSSLKKPLL IVLLVCITSV LLVITYMYPQ HNNSKSSACA GLSSRGCQAA LSGWLPVHVR KFTDEEVAAR VVIKDILRLP PALTAKSKIA
101: FMFLTPGTLP FEKLWDKFFQ GQEGRFSIYI HPSRLRPVHI SRHFSDREIH SDHVTWGRIS MVDAERRLLA NALEDPDNQH FVLLSESCIP LHTFDYTYRY
201: LMHANVSFID SFEDLGPHGT GRHMDHMLPE IPRQDFRKGA QWFTMKRQHA VIVMADGLYY SKFREYCRPG VEANKNCIAD EHYLPTFFHM LDPGGISNWS
301: VTYVDWSERR WHPKTYRARD VSLKLLKNIT SDDMSVHVTS VGKRGEELRW PCTWKGIRRP CYLFARKLHS DALYKLVRLF PNYTSTVV

Arabidopsis Description

At5g57270 [Source:UniProtKB/TrEMBL;Acc:Q8W4D1]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.