Factsheet for Bra008941.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
vacuole 2
golgi 3
plastid 1
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69735	Canola	golgi	99.22	99.22
CDX97141	Canola	golgi	95.85	95.85
CDX97139	Canola	golgi	95.85	95.85
CDX97140	Canola	golgi	93.52	88.05
AT5G11730.1	Thale cress	golgi	87.82	87.82
Bra006113.1-P	Field mustard	golgi	82.9	82.9
Bra006114.1-P	Field mustard	golgi	76.68	82.68
Bra009874.1-P	Field mustard	golgi	73.06	73.06
EER93518	Sorghum	golgi, plasma membrane, plastid	61.4	61.4
GSMUA_Achr1P14240_001	Banana	golgi	55.18	59.5
Zm00001d033892_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	56.22	59.45
TraesCS4A01G253400.1	Wheat	golgi, plasma membrane, plastid	60.1	59.34
GSMUA_Achr3P25730_001	Banana	golgi	55.18	59.33
TraesCS4D01G061000.1	Wheat	golgi, plasma membrane, plastid	59.84	58.93
TraesCS4B01G062000.1	Wheat	golgi, plasma membrane, plastid	59.59	58.67
Bra031273.1-P	Field mustard	golgi	57.77	58.53
HORVU4Hr1G010270.2	Barley	golgi, peroxisome	60.1	58.0
Bra030418.1-P	Field mustard	golgi	58.29	57.84
EER93517	Sorghum	golgi, mitochondrion, plasma membrane	59.59	57.21
EER93516	Sorghum	golgi	56.22	57.11
Zm00001d033891_P001	Maize	cytosol, golgi, plasma membrane	58.29	55.83
Zm00001d033890_P001	Maize	golgi	60.62	55.58
Os03t0731050-00	Rice	plastid	58.81	53.04
Bra006342.1-P	Field mustard	cytosol	44.04	48.99
Bra015963.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	43.52	48.0
Bra019894.1-P	Field mustard	golgi	44.3	45.36
Bra008639.1-P	Field mustard	golgi	46.63	44.44
Bra004303.1-P	Field mustard	golgi, vacuole	47.41	43.99
Bra033941.1-P	Field mustard	golgi	46.37	43.66
Bra018450.1-P	Field mustard	golgi	45.6	43.56
Bra019951.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	46.37	43.24
Bra004302.1-P	Field mustard	golgi	42.75	41.67
Bra013927.1-P	Field mustard	golgi, plastid	35.75	37.7
Bra011262.1-P	Field mustard	golgi	36.27	37.23
Bra002743.1-P	Field mustard	golgi	35.23	34.96
Bra012167.1-P	Field mustard	mitochondrion	35.49	34.34
Bra010446.1-P	Field mustard	mitochondrion	33.94	33.68
Bra010307.1-P	Field mustard	golgi, mitochondrion	34.72	33.42
Bra036729.1-P	Field mustard	mitochondrion	34.2	33.33
Bra019138.1-P	Field mustard	plastid	33.68	33.33
Bra038843.1-P	Field mustard	mitochondrion	33.68	32.66
Bra024111.1-P	Field mustard	mitochondrion	31.35	32.27
Bra008752.1-P	Field mustard	mitochondrion	30.31	31.97
Bra034487.1-P	Field mustard	mitochondrion	30.31	31.37
Bra016802.1-P	Field mustard	golgi	29.27	30.05
Bra031797.1-P	Field mustard	cytosol	25.91	29.59

Protein Annotations

EnsemblPlants:Bra008941.1	EnsemblPlants:Bra008941.1-P	EnsemblPlantsGene:Bra008941	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF54	PFAM:PF02485	SEG:seg	TMHMM:TMhelix	UniParc:UPI000254410B	UniProt:M4CXJ4
MapMan:35.1	:	:	:	:	:

Description

AT5G11730 (E=5e-195) | unknown protein

Coordinates

chrA10:-:14499279..14500667

Molecular Weight (calculated)

44350.9 Da

IEP (calculated)

9.455

GRAVY (calculated)

-0.116

Length

386 amino acids

Sequence
(BLAST)

001: MQTRVIQMEE GKDNGILIRS VKSKPFPAKL LLILGLFLAF ALTVFVISVS TIKYTGLQSV VTTVTSGFVT CREDEPSSLS KWIQPPAVLM HNMTDEELLW
101: RASFWPRRKE YPFQRVPKIA FMFLTKGPLP LALLWERFLK GHTGLYSVYV HPHPSFTAKF PAGSVFYQRQ IPSQVAEWGR MTMCDAEKRL LANALLDISN
201: EWFVLVSESC IPLFNFTTIY SYLSRSKHSF MGAFDDPGPF GRGRYNDNME PEVPITKWRK GSQWFEINRE LAATIVKDTL YYPKFKEFCR PACYVDEHYF
301: PTMLTIEKPM ALANRSLTWV DWSRGGPHPA TFGRSDITEK FFEKILDGKN CVYNGRNTSM CYLFARKFAP SALESLLHIA PKILGY

Best Arabidopsis Sequence Match ( AT5G11730.1 )
(BLAST)

001: MQNRIVQLEE GKENGITVRS GHYKGFPSKL LLLLGLFLTF SVTVFIISVS TIKYTGIQSV VTTVTSSFVP CREGEPNSLS KWIQPPAVLM HNMSDEELLW
101: RASFWPRRKE YPFKRVPKVA FMFLTKGPLP LASLWERFLK GHKGLYSVYL HPHPSFTAKF PASSVFHRRQ IPSQVAEWGR MSMCDAEKRL LANALLDVSN
201: EWFVLVSESC IPLYNFTTIY SYLSRSKHSF MGAFDDPGPF GRGRYNGNME PEVPLTKWRK GSQWFEVNRD LAATIVKDTL YYPKFKEFCR PACYVDEHYF
301: PTMLTIEKPT VLANRSLTWV DWSRGGPHPA TFGRSDITEN FFGKIFDGRN CSYNGRNTSM CYLFARKFAP SALEPLLHIA PKILGF

Arabidopsis Description

At5g11730 [Source:UniProtKB/TrEMBL;Acc:Q9LYF7]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.