Factsheet for Bra004303.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

plastid 3
mitochondrion 2
golgi 3
extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96025	Canola	golgi, vacuole	100.0	100.0
Bra033941.1-P	Field mustard	golgi	86.54	87.8
AT1G68390.1	Thale cress	plastid	83.17	84.8
Bra004302.1-P	Field mustard	golgi	61.78	64.9
Bra015963.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	41.83	49.71
Bra031273.1-P	Field mustard	golgi	44.71	48.82
Bra006114.1-P	Field mustard	golgi	41.11	47.77
Bra008941.1-P	Field mustard	golgi	43.99	47.41
Bra006342.1-P	Field mustard	cytosol	39.42	47.26
Bra030418.1-P	Field mustard	golgi	43.75	46.79
Bra006113.1-P	Field mustard	golgi	43.03	46.37
Bra019894.1-P	Field mustard	golgi	41.59	45.89
Bra018450.1-P	Field mustard	golgi	44.23	45.54
Bra019951.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	44.71	44.93
Bra009874.1-P	Field mustard	golgi	39.9	43.01
Bra008639.1-P	Field mustard	golgi	41.83	42.96
Bra011262.1-P	Field mustard	golgi	32.45	35.9
Bra013927.1-P	Field mustard	golgi, plastid	30.53	34.7
Bra010307.1-P	Field mustard	golgi, mitochondrion	32.69	33.92
Bra010446.1-P	Field mustard	mitochondrion	31.01	33.16
Bra024111.1-P	Field mustard	mitochondrion	29.81	33.07
Bra019138.1-P	Field mustard	plastid	30.29	32.31
Bra002743.1-P	Field mustard	golgi	30.05	32.13
Bra012167.1-P	Field mustard	mitochondrion	30.77	32.08
Bra036729.1-P	Field mustard	mitochondrion	30.29	31.82
Bra038843.1-P	Field mustard	mitochondrion	30.05	31.41
Bra008752.1-P	Field mustard	mitochondrion	27.16	30.87
Bra034487.1-P	Field mustard	mitochondrion	27.64	30.83
Bra016802.1-P	Field mustard	golgi	27.64	30.59
Bra031797.1-P	Field mustard	cytosol	23.56	28.99

Protein Annotations

EnsemblPlants:Bra004303.1	EnsemblPlants:Bra004303.1-P	EnsemblPlantsGene:Bra004303	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF56	PFAM:PF02485	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002541742	UniProt:M4CJB9
MapMan:35.1	:	:	:	:	:

Description

AT1G68390 (E=1e-167) | unknown protein

Coordinates

chrA07:-:17862782..17867150

Molecular Weight (calculated)

48116.0 Da

IEP (calculated)

9.483

GRAVY (calculated)

-0.378

Length

416 amino acids

Sequence
(BLAST)

001: MKNQKEQNSS LSSSSPSLVA KLLNAQYHQF LNLLSYSLIL CCGIIIGILL HSSLQDISSI SSPNIQRISQ LFLVSSIPSP PHPSPSPPPP SPPPPSQPEH
101: IGLEQFLRPP KKIMHDMEEE ELLWRASMTP KIKNYPFRRT PKVAFMFLTK GHLPLAPLWE RFFRGHEGLF SIYVHSYPSY NQTDPEGSVF HGRQIPSKRV
201: DWGYVNMVEA EQRLLANALL DISNERFVLL SESCIPLFNF TTVYSYLTKS IQTHVQSYDE LGGVGRGRYS PEMKPRIQLR HWRKGSQWFE LDRAMALEII
301: SDKIYWPLFY RYCHHGCYTD EHYIPTLLNI KSSLGRRNSN RTLTWVDWSK GGPHPNRFIR YEVTEEFLVK LRSGGEENRQ CYHNGEKTNI CYLFARKFLP
401: TALGRLLRLA PTVLYF

Best Arabidopsis Sequence Match ( AT1G68390.1 )
(BLAST)

001: MKNQKDQNSS SLSSSSPSLT TKLLNAQYHH FLNLLSYSLI LCCGIIIGIL LHSSLQNFSS NSSLSIQRIS QLFIVSSLPP SPPPPPPPSP PSEPEQNGLK
101: SFIEPPEKLM HDMEDEELLW RASMAPKIKN YPFPRTPKVA FMFMTKGHLP LARLWERFFR GHEGLFTIYV HSYPSYNQSD PEDSVFRGRH IPSKRVDWGY
201: VNMVEAEQRL LANALLDISN ERFVLLSESC IPLFNFTTVY SYLINSTQTH VESYDQLGGV GRGRYSPLMQ PHVQLRHWRK GSQWIEVDRA MALEIISDRI
301: YWPLFYSYCH HGCYADEHYI PTLLNIKSSL KRRNSNRTLT WVDWSKGGPH PNRFIRHEVT AEFMENLRSG GECLYNGEET NICYLFARKF LPTALDRLLR
401: LSRTVLHF

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9M9C4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.