Factsheet for Bra009874.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
cytosol 2
golgi 4
plasma membrane 2
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	golgi
Plant-mPloc:	golgi, plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88209	Canola	golgi	89.9	99.14
AT5G25970.2	Thale cress	golgi	84.2	83.98
Bra008941.1-P	Field mustard	golgi	73.06	73.06
Bra006114.1-P	Field mustard	golgi	66.58	71.79
Bra006113.1-P	Field mustard	golgi	70.47	70.47
EER93518	Sorghum	golgi, plasma membrane, plastid	58.29	58.29
GSMUA_Achr1P14240_001	Banana	golgi	53.37	57.54
GSMUA_Achr3P25730_001	Banana	golgi	53.37	57.38
Zm00001d033892_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	53.37	56.44
TraesCS4A01G253400.1	Wheat	golgi, plasma membrane, plastid	56.99	56.27
TraesCS4D01G061000.1	Wheat	golgi, plasma membrane, plastid	56.48	55.61
TraesCS4B01G062000.1	Wheat	golgi, plasma membrane, plastid	56.22	55.36
Bra031273.1-P	Field mustard	golgi	54.4	55.12
EER93517	Sorghum	golgi, mitochondrion, plasma membrane	57.25	54.98
Bra030418.1-P	Field mustard	golgi	55.18	54.76
EER93516	Sorghum	golgi	53.63	54.47
HORVU4Hr1G010270.2	Barley	golgi, peroxisome	55.96	54.0
Zm00001d033891_P001	Maize	cytosol, golgi, plasma membrane	55.7	53.35
Zm00001d033890_P001	Maize	golgi	56.99	52.26
Os03t0731050-00	Rice	plastid	55.18	49.77
Bra006342.1-P	Field mustard	cytosol	41.45	46.11
Bra019894.1-P	Field mustard	golgi	43.26	44.3
Bra018450.1-P	Field mustard	golgi	45.85	43.81
Bra015963.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	39.38	43.43
Bra019951.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	46.11	43.0
Bra008639.1-P	Field mustard	golgi	43.52	41.48
Bra004302.1-P	Field mustard	golgi	41.97	40.91
Bra033941.1-P	Field mustard	golgi	42.75	40.24
Bra004303.1-P	Field mustard	golgi, vacuole	43.01	39.9
Bra013927.1-P	Field mustard	golgi, plastid	35.49	37.43
Bra011262.1-P	Field mustard	golgi	34.97	35.9
Bra002743.1-P	Field mustard	golgi	35.23	34.96
Bra012167.1-P	Field mustard	mitochondrion	35.23	34.09
Bra036729.1-P	Field mustard	mitochondrion	34.46	33.59
Bra019138.1-P	Field mustard	plastid	33.68	33.33
Bra010446.1-P	Field mustard	mitochondrion	33.42	33.16
Bra010307.1-P	Field mustard	golgi, mitochondrion	33.68	32.42
Bra038843.1-P	Field mustard	mitochondrion	33.16	32.16
Bra024111.1-P	Field mustard	mitochondrion	30.57	31.47
Bra008752.1-P	Field mustard	mitochondrion	29.79	31.42
Bra016802.1-P	Field mustard	golgi	29.53	30.32
Bra034487.1-P	Field mustard	mitochondrion	28.5	29.49
Bra031797.1-P	Field mustard	cytosol	25.39	28.99

Protein Annotations

EnsemblPlants:Bra009874.1	EnsemblPlants:Bra009874.1-P	EnsemblPlantsGene:Bra009874	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF54	PFAM:PF02485	SEG:seg	TMHMM:TMhelix	UniParc:UPI000253F3B5	UniProt:M4D076
MapMan:35.1	:	:	:	:	:

Description

AT5G25970 (E=8e-186) | unknown protein

Coordinates

chrA06:+:17827309..17829231

Molecular Weight (calculated)

43880.1 Da

IEP (calculated)

7.722

GRAVY (calculated)

0.004

Length

386 amino acids

Sequence
(BLAST)

001: MLSRAVQLEE GKEILVTCGR TGLNKAFPIK LLLLLVFFLA FTVAFIIITV STIKYYGINS VVTSVTSGFV PCGAEPNVLD KWIKPPLALM HNMSDEELLW
101: LASFMPQRKD YPFTRVPKIA FMFLTLGPLP FAPLWERLLK GYEKHYSVYI HSQVSSSAEF PASSVFYRRQ IPSQVAEWGR MTICDAERRL LANALLDISN
201: EWFVLLSESC IPLYNFTTIY GYISKSKHSF MGSFDDPSPY GRGRYNGNMS PEVSIEQWRK GSQWFEVNRE LAVSLVKDTL YYPKFKEFCT PACYVDEHYF
301: PTMLTIEKPA ALANRSLTWV DWSRGGAHPA TFGEPDINED FFAKIMKGDN CTYNGESTSM CSLFARKFSP SALEPLIQIA PKILSF

Best Arabidopsis Sequence Match ( AT5G25970.3 )
(BLAST)

001: MQCSRVLQLE EGKEIVVTSS RTGLTKAFPY KLLLLLGFFL AFTVVLFFIS VSTIKYYGIN SVVTSVTSSF VPCHEKINDL DKWIKPLVVL MHNMSDEELL
101: WGASFMPRRK EYPFNRVPKI AFMFLTMGPL PLAPLWERLL KGHEKLYSVY IHSPVSSSAK FPASSVFYRR HIPSQVAEWG RMTMCDAERR LLANALLDIS
201: NEWFVLLSES CIPLFNFTTI YTYMTKSEHS FMGSFDDPGA YGRGRYHGNM APEVFIDQWR KGSQWFEINR ELAVSIVKDT LYYPKFKEFC QPACYVDEHY
301: FPTMLTIEKP AALANRSVTW VDWSRGGAHP ATFGAQDINE EFFARILKGD NCTYNGGYTS MCYLFARKFS PSALEPLVQI APKLLSS

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q1PDT4]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.