Factsheet for Bra033941.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 3
mitochondrion 1
golgi 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44904	Canola	golgi	100.0	100.0
CDX81507	Canola	golgi	97.07	97.07
Bra004303.1-P	Field mustard	golgi, vacuole	87.8	86.54
AT1G68390.1	Thale cress	plastid	80.49	80.88
Bra004302.1-P	Field mustard	golgi	61.22	63.38
Bra015963.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	41.46	48.57
Bra006342.1-P	Field mustard	cytosol	39.76	46.97
Bra019894.1-P	Field mustard	golgi	43.17	46.95
Bra031273.1-P	Field mustard	golgi	43.17	46.46
Bra008941.1-P	Field mustard	golgi	43.66	46.37
Bra006114.1-P	Field mustard	golgi	40.49	46.37
Bra006113.1-P	Field mustard	golgi	42.93	45.6
Bra030418.1-P	Field mustard	golgi	42.68	44.99
Bra018450.1-P	Field mustard	golgi	43.66	44.31
Bra019951.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	43.66	43.24
Bra008639.1-P	Field mustard	golgi	42.44	42.96
Bra009874.1-P	Field mustard	golgi	40.24	42.75
Bra011262.1-P	Field mustard	golgi	33.41	36.44
Bra013927.1-P	Field mustard	golgi, plastid	30.0	33.61
Bra010307.1-P	Field mustard	golgi, mitochondrion	31.71	32.42
Bra024111.1-P	Field mustard	mitochondrion	29.51	32.27
Bra002743.1-P	Field mustard	golgi	30.0	31.62
Bra012167.1-P	Field mustard	mitochondrion	30.49	31.33
Bra036729.1-P	Field mustard	mitochondrion	30.0	31.06
Bra010446.1-P	Field mustard	mitochondrion	29.27	30.85
Bra019138.1-P	Field mustard	plastid	29.27	30.77
Bra038843.1-P	Field mustard	mitochondrion	29.76	30.65
Bra016802.1-P	Field mustard	golgi	27.8	30.32
Bra034487.1-P	Field mustard	mitochondrion	27.56	30.29
Bra008752.1-P	Field mustard	mitochondrion	26.83	30.05
Bra031797.1-P	Field mustard	cytosol	22.93	27.81

Protein Annotations

EnsemblPlants:Bra033941.1	EnsemblPlants:Bra033941.1-P	EnsemblPlantsGene:Bra033941	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF56	PFAM:PF02485	SEG:seg	TMHMM:TMhelix	UniParc:UPI00025462C2	UniProt:M4EYP9
MapMan:35.1	:	:	:	:	:

Description

AT1G68390 (E=3e-158) | unknown protein

Coordinates

chrA02:+:10759575..10761855

Molecular Weight (calculated)

47201.9 Da

IEP (calculated)

9.479

GRAVY (calculated)

-0.284

Length

410 amino acids

Sequence
(BLAST)

001: MKNLKEQSSF LSSSSPSLVA KLLNAQYHHF LNLISFSLIL CCGIIIGILL HSSLQDISST SSLNIQRISQ LFLVSSPPPP TIPSPPPPPS KPVRVGLKGF
101: LRSPKKIMHD MEDEELLWRA SMAPKIRSYP FYRTPKVAFM FLTKGHLPLA PLWEKFFKGH EELFNIYVHS YPSNNESYPE GSVFHGRQIP SKRVDWGYVN
201: MVEAEQRLLA NALLDISNER FVLLSESCIP LFNFTTVYSY LTTSTQTHVE SYDQLGGVGR GRYSPEMKPR VQLRHWRKGS QWFELDRAMA LEIISDTTYW
301: PLFYRYCHHG CYADEHYIPT LLNIKSSLGG RNSNRTLTWV DWTNGGPHPT RFIRYEVTEE LLVKLRNGDD KNRQCYHNGE KTNVCYLFAR KFLPTALGRL
401: LRLAPSVLYF

Best Arabidopsis Sequence Match ( AT1G68390.1 )
(BLAST)

001: MKNQKDQNSS SLSSSSPSLT TKLLNAQYHH FLNLLSYSLI LCCGIIIGIL LHSSLQNFSS NSSLSIQRIS QLFIVSSLPP SPPPPPPPSP PSEPEQNGLK
101: SFIEPPEKLM HDMEDEELLW RASMAPKIKN YPFPRTPKVA FMFMTKGHLP LARLWERFFR GHEGLFTIYV HSYPSYNQSD PEDSVFRGRH IPSKRVDWGY
201: VNMVEAEQRL LANALLDISN ERFVLLSESC IPLFNFTTVY SYLINSTQTH VESYDQLGGV GRGRYSPLMQ PHVQLRHWRK GSQWIEVDRA MALEIISDRI
301: YWPLFYSYCH HGCYADEHYI PTLLNIKSSL KRRNSNRTLT WVDWSKGGPH PNRFIRHEVT AEFMENLRSG GECLYNGEET NICYLFARKF LPTALDRLLR
401: LSRTVLHF

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9M9C4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.