CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plasma membrane, mitochondrion

Predictor Summary:

nucleus 1
golgi 2
plastid 1
extracellular 1
plasma membrane 2
endoplasmic reticulum 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	mitochondrion
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033891_P001	Maize	cytosol, golgi, plasma membrane	95.02	94.79
EER93518	Sorghum	golgi, plasma membrane, plastid	73.63	76.68
TraesCS4B01G062000.1	Wheat	golgi, plasma membrane, plastid	74.13	76.02
TraesCS4A01G253400.1	Wheat	golgi, plasma membrane, plastid	73.88	75.96
TraesCS4D01G061000.1	Wheat	golgi, plasma membrane, plastid	73.63	75.51
HORVU4Hr1G010270.2	Barley	golgi, peroxisome	74.13	74.5
EER93516	Sorghum	golgi	69.4	73.42
PGSC0003DMT400035937	Potato	mitochondrion	50.25	68.71
VIT_09s0002g02660.t01	Wine grape	cytosol	49.01	67.01
GSMUA_Achr1P14240_001	Banana	golgi	56.47	63.41
CDX80552	Canola	cytosol	24.13	63.4
KRH48972	Soybean	cytosol	33.58	63.38
GSMUA_Achr3P25730_001	Banana	golgi	56.47	63.23
KRH13326	Soybean	cytosol	33.08	62.44
CDX78440	Canola	cytosol	50.0	62.23
Os03t0731050-00	Rice	plastid	65.42	61.45
AT5G11730.1	Thale cress	golgi	57.46	59.84
Bra008941.1-P	Field mustard	golgi	57.21	59.59
CDX69735	Canola	golgi	56.97	59.33
CDX97139	Canola	golgi	56.72	59.07
CDX97141	Canola	golgi	56.72	59.07
Solyc08g065860.2.1	Tomato	golgi	55.72	58.79
CDX70417	Canola	cytosol	43.78	58.67
KRH47176	Soybean	cytosol, golgi, plasma membrane	56.22	58.4
KRH05512	Soybean	nucleus	55.22	58.27
AT3G21310.1	Thale cress	golgi	55.47	58.22
VIT_04s0008g00690.t01	Wine grape	golgi, nucleus, plasma membrane, plastid	55.72	58.18
AT5G25970.2	Thale cress	golgi	55.72	57.88
Bra006114.1-P	Field mustard	golgi	51.49	57.82
Bra006113.1-P	Field mustard	golgi	55.47	57.77
KRH44223	Soybean	cytosol, golgi, plasma membrane	55.47	57.62
Bra031273.1-P	Field mustard	golgi	54.48	57.48
Bra009874.1-P	Field mustard	golgi	54.98	57.25
CDY51451	Canola	golgi	54.23	57.22
KRH15500	Soybean	nucleus	53.98	57.11
CDY56916	Canola	cytosol, golgi, plasma membrane, plastid	53.98	56.96
CDX78439	Canola	golgi	56.22	56.36
CDX88209	Canola	golgi	49.01	56.29
Solyc03g121280.2.1	Tomato	golgi, nucleus, plasma membrane	53.48	55.84
CDY43927	Canola	golgi	53.98	55.78
Bra030418.1-P	Field mustard	golgi	53.98	55.78
CDX87842	Canola	golgi	53.98	55.78
PGSC0003DMT400006434	Potato	golgi, nucleus, plasma membrane	53.23	55.44
CDX97140	Canola	golgi	55.72	54.63
PGSC0003DMT400012489	Potato	golgi	50.25	54.16
Solyc06g062490.2.1	Tomato	golgi	49.25	53.51
AT1G51770.1	Thale cress	golgi	53.23	52.71
KXG24124	Sorghum	cytosol, golgi, plasma membrane, plastid	50.99	50.37
CDX70416	Canola	golgi	54.73	50.34
EES03971	Sorghum	golgi	44.53	45.32
EES14395	Sorghum	endoplasmic reticulum, golgi, plastid	46.27	45.15
EES11719	Sorghum	golgi, mitochondrion, peroxisome	46.02	41.48
EES02543	Sorghum	golgi	40.3	40.81
EES02542	Sorghum	golgi	41.04	40.64
KXG31955	Sorghum	golgi	41.04	39.29
KXG20769	Sorghum	golgi	35.07	37.9
KXG24737	Sorghum	golgi	35.57	37.34
EES12818	Sorghum	golgi	35.32	36.69
OQU75988	Sorghum	golgi, mitochondrion, plastid, vacuole	24.13	36.6
KXG20537	Sorghum	mitochondrion	34.33	36.51
EES04616	Sorghum	golgi	34.58	36.01
OQU84731	Sorghum	plastid	42.79	35.83
EES19116	Sorghum	golgi	30.6	32.28
KXG33181	Sorghum	golgi, mitochondrion, plastid	29.35	30.18

Protein Annotations

MapMan:35.1	EntrezGene:8060528	UniProt:C5WLY9	EnsemblPlants:EER93517	ProteinID:EER93517	ProteinID:EER93517.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	InterPro:Glyco_trans_14	PFAM:PF02485	PANTHER:PTHR31042	PANTHER:PTHR31042:SF54	EnsemblPlantsGene:SORBI_3001G103100
TMHMM:TMhelix	UniParc:UPI0001A82768	RefSeq:XP_002466519.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:7894277..7896906

Molecular Weight (calculated)

45343.3 Da

IEP (calculated)

6.713

GRAVY (calculated)

-0.191

Length

402 amino acids

Sequence
(BLAST)

001: MAMAMRVESV EEAKQAAILP GAQEQRRTFP AGMLKLFLGL MLFGVVMGLS AFGVFLARHA GEVAAAAPAL FRPCLGAAAA EPEPEEGLER WTRPPARAQH
101: AMTDEELLWL ASYAPRARAG SGYPFRRVPK VAFMFLTHGP LPLAPLWERF FRGNEGRYSI YVHTMPLYRA NFTADSVFYR RQIPSQDVQW GQMTMCDAER
201: RLLANALLDI SNEWFVLVSE SCIPLFDFNT TYGYFQNSSH SFVMSIDDPG RDGRGRYNLN MAPEVELEQW RKGWQWFEAD RDLAVAIVED TVYYPKFKQF
301: CRPGCYADEH YIQTMLKIEA PHKLANRTAT WVDWSRGGPN SAHPATFGRG DITEEFLKGI RGGETCLYNG QNTTLCYLFA RKFAPSALEP LLELAPTVLG
401: FG

Best Arabidopsis Sequence Match ( AT5G11730.1 )
(BLAST)

001: MQNRIVQLEE GKENGITVRS GHYKGFPSKL LLLLGLFLTF SVTVFIISVS TIKYTGIQSV VTTVTSSFVP CREGEPNSLS KWIQPPAVLM HNMSDEELLW
101: RASFWPRRKE YPFKRVPKVA FMFLTKGPLP LASLWERFLK GHKGLYSVYL HPHPSFTAKF PASSVFHRRQ IPSQVAEWGR MSMCDAEKRL LANALLDVSN
201: EWFVLVSESC IPLYNFTTIY SYLSRSKHSF MGAFDDPGPF GRGRYNGNME PEVPLTKWRK GSQWFEVNRD LAATIVKDTL YYPKFKEFCR PACYVDEHYF
301: PTMLTIEKPT VLANRSLTWV DWSRGGPHPA TFGRSDITEN FFGKIFDGRN CSYNGRNTSM CYLFARKFAP SALEPLLHIA PKILGF

Arabidopsis Description

At5g11730 [Source:UniProtKB/TrEMBL;Acc:Q9LYF7]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.