Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- nucleus 2
- golgi 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43927 | Canola | golgi | 79.8 | 83.29 |
| CDX87842 | Canola | golgi | 79.8 | 83.29 |
| Bra030418.1-P | Field mustard | golgi | 79.8 | 83.29 |
| AT3G21310.1 | Thale cress | golgi | 70.2 | 74.41 |
| VIT_09s0002g02660.t01 | Wine grape | cytosol | 49.26 | 68.03 |
| KRH48972 | Soybean | cytosol | 35.47 | 67.61 |
| KRH13326 | Soybean | cytosol | 35.47 | 67.61 |
| KRH47176 | Soybean | cytosol, golgi, plasma membrane | 60.84 | 63.82 |
| KRH44223 | Soybean | cytosol, golgi, plasma membrane | 58.62 | 61.5 |
| Solyc03g121280.2.1 | Tomato | golgi, nucleus, plasma membrane | 56.9 | 60.0 |
| GSMUA_Achr3P25730_001 | Banana | golgi | 52.46 | 59.33 |
| PGSC0003DMT400006434 | Potato | golgi, nucleus, plasma membrane | 56.16 | 59.07 |
| EER93518 | Sorghum | golgi, plasma membrane, plastid | 55.66 | 58.55 |
| AT5G11730.1 | Thale cress | golgi | 55.42 | 58.29 |
| PGSC0003DMT400012489 | Potato | golgi | 53.2 | 57.91 |
| Zm00001d033892_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 51.48 | 57.26 |
| Solyc06g062490.2.1 | Tomato | golgi | 51.72 | 56.76 |
| AT5G25970.2 | Thale cress | golgi | 53.45 | 56.07 |
| GSMUA_Achr1P14240_001 | Banana | golgi | 48.77 | 55.31 |
| EER93516 | Sorghum | golgi | 51.72 | 55.26 |
| TraesCS4D01G061000.1 | Wheat | golgi, plasma membrane, plastid | 52.96 | 54.85 |
| TraesCS4A01G253400.1 | Wheat | golgi, plasma membrane, plastid | 52.71 | 54.73 |
| TraesCS4B01G062000.1 | Wheat | golgi, plasma membrane, plastid | 52.71 | 54.59 |
| EER93517 | Sorghum | golgi, mitochondrion, plasma membrane | 52.71 | 53.23 |
| Zm00001d033890_P001 | Maize | golgi | 55.17 | 53.21 |
| HORVU4Hr1G010270.2 | Barley | golgi, peroxisome | 52.22 | 53.0 |
| Zm00001d033891_P001 | Maize | cytosol, golgi, plasma membrane | 51.48 | 51.86 |
| Os03t0731050-00 | Rice | plastid | 51.72 | 49.07 |
| AT1G10280.1 | Thale cress | golgi | 45.57 | 44.9 |
| AT1G68390.1 | Thale cress | plastid | 43.84 | 43.63 |
| AT1G68380.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 42.12 | 43.62 |
| AT1G10880.1 | Thale cress | golgi | 38.67 | 40.67 |
| AT1G73810.1 | Thale cress | golgi, nucleus, peroxisome | 41.63 | 40.43 |
| AT5G16170.1 | Thale cress | golgi | 40.89 | 40.39 |
| AT4G31350.4 | Thale cress | golgi | 33.74 | 36.44 |
| AT4G30060.1 | Thale cress | golgi | 34.98 | 35.41 |
| AT5G57270.5 | Thale cress | golgi | 33.0 | 34.54 |
| AT4G25870.1 | Thale cress | cytosol, golgi, mitochondrion, plastid | 32.76 | 34.19 |
| AT2G19160.1 | Thale cress | golgi, mitochondrion | 33.0 | 34.01 |
| AT5G14550.1 | Thale cress | mitochondrion | 30.79 | 33.16 |
| AT1G11940.1 | Thale cress | golgi | 29.31 | 31.07 |
| AT1G62305.1 | Thale cress | golgi | 28.82 | 30.95 |
Protein Annotations
| MapMan:35.1 | EntrezGene:841603 | UniProt:A0A178WGY9 | ProteinID:AEE32713.1 | ArrayExpress:AT1G51770 | EnsemblPlantsGene:AT1G51770 |
| RefSeq:AT1G51770 | TAIR:AT1G51770 | RefSeq:AT1G51770-TAIR-G | EnsemblPlants:AT1G51770.1 | TAIR:AT1G51770.1 | EMBL:DQ492228 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016740 | GO:GO:0016757 | InterPro:Glyco_trans_14 | EMBL:KJ138966 | RefSeq:NP_175588.2 | ProteinID:OAP17516.1 |
| PFAM:PF02485 | PO:PO:0000293 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF54 | UniProt:Q1G300 | TMHMM:TMhelix |
| UniParc:UPI0000D7C8E9 | SEG:seg | : | : | : | : |
Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q1G300]
Coordinates
chr1:+:19201789..19203386
Molecular Weight (calculated)
46859.7 Da
IEP (calculated)
9.180
GRAVY (calculated)
-0.183
Length
406 amino acids
Sequence
(BLAST)
(BLAST)
001: MKVMVMEMEE CVKENGSSTP KSRVTNQSRA LLPLRLLQIL LLFLVLTLGI SVVSIHMIKF LKIQRLDPVA PITLLSTYNH ESVTLDSFIR PPSNVWHTMN
101: DSELLWRASI EPQRNGYPFR RVPKLAFMFL AKGPLPFAPL WEKFCKGHEG LYSIYVHSLP SYKSDFSRSS VFYRRYIPSQ AVAWGEMSMG EAERRLLANA
201: LLDISNEWFV LLSESCIPLR GFSFIYSYVS ESRYSFMGAA DEEGPDGRGR YRTEMEPEIT LSQWRKGSQW FEINRKLAVE IVQDTTYYPK FKEFCRPPCY
301: VDEHYFPTML SMKHRVLLAN RTLTWTDWSR GGAHPATFGK ADVTESFLKK LTGAKSCLYN DHQSQICYLF ARKFAPSALE PLLQLAPKIL ELGSNISSTR
401: HSWYLF
101: DSELLWRASI EPQRNGYPFR RVPKLAFMFL AKGPLPFAPL WEKFCKGHEG LYSIYVHSLP SYKSDFSRSS VFYRRYIPSQ AVAWGEMSMG EAERRLLANA
201: LLDISNEWFV LLSESCIPLR GFSFIYSYVS ESRYSFMGAA DEEGPDGRGR YRTEMEPEIT LSQWRKGSQW FEINRKLAVE IVQDTTYYPK FKEFCRPPCY
301: VDEHYFPTML SMKHRVLLAN RTLTWTDWSR GGAHPATFGK ADVTESFLKK LTGAKSCLYN DHQSQICYLF ARKFAPSALE PLLQLAPKIL ELGSNISSTR
401: HSWYLF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.