Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 3
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH48972 | Soybean | cytosol | 51.7 | 71.36 |
| KRH13326 | Soybean | cytosol | 51.02 | 70.42 |
| KRH47176 | Soybean | cytosol, golgi, plasma membrane | 77.21 | 58.66 |
| KRH44223 | Soybean | cytosol, golgi, plasma membrane | 76.53 | 58.14 |
| VIT_14s0006g02700.t01 | Wine grape | cytosol | 58.16 | 57.77 |
| VIT_01s0011g03840.t01 | Wine grape | cytosol | 58.16 | 57.77 |
| Solyc03g121280.2.1 | Tomato | golgi, nucleus, plasma membrane | 74.49 | 56.88 |
| VIT_17s0000g03420.t01 | Wine grape | cytosol | 56.8 | 56.8 |
| PGSC0003DMT400006434 | Potato | golgi, nucleus, plasma membrane | 74.49 | 56.74 |
| PGSC0003DMT400012489 | Potato | golgi | 70.75 | 55.76 |
| VIT_17s0000g03410.t01 | Wine grape | cytosol | 55.78 | 55.59 |
| Solyc06g062490.2.1 | Tomato | golgi | 69.39 | 55.14 |
| AT3G21310.1 | Thale cress | golgi | 71.77 | 55.09 |
| VIT_04s0008g00690.t01 | Wine grape | golgi, nucleus, plasma membrane, plastid | 71.09 | 54.29 |
| VIT_17s0000g03400.t01 | Wine grape | cytosol | 54.42 | 54.05 |
| Zm00001d033892_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 66.67 | 53.7 |
| EER93518 | Sorghum | golgi, plasma membrane, plastid | 69.73 | 53.11 |
| GSMUA_Achr1P14240_001 | Banana | golgi | 64.29 | 52.79 |
| EER93516 | Sorghum | golgi | 67.69 | 52.37 |
| Bra031273.1-P | Field mustard | golgi | 67.69 | 52.23 |
| CDY51451 | Canola | golgi | 67.69 | 52.23 |
| TraesCS4B01G062000.1 | Wheat | golgi, plasma membrane, plastid | 68.03 | 51.02 |
| CDY56916 | Canola | cytosol, golgi, plasma membrane, plastid | 65.99 | 50.92 |
| TraesCS4A01G253400.1 | Wheat | golgi, plasma membrane, plastid | 67.69 | 50.9 |
| TraesCS4D01G061000.1 | Wheat | golgi, plasma membrane, plastid | 67.69 | 50.77 |
| GSMUA_Achr3P25730_001 | Banana | golgi | 61.9 | 50.7 |
| CDY43927 | Canola | golgi | 66.67 | 50.39 |
| Bra030418.1-P | Field mustard | golgi | 66.67 | 50.39 |
| HORVU4Hr1G010270.2 | Barley | golgi, peroxisome | 68.37 | 50.25 |
| CDX87842 | Canola | golgi | 66.33 | 50.13 |
| AT1G51770.1 | Thale cress | golgi | 68.03 | 49.26 |
| EER93517 | Sorghum | golgi, mitochondrion, plasma membrane | 67.01 | 49.01 |
| Os03t0731050-00 | Rice | plastid | 71.09 | 48.83 |
| Zm00001d033890_P001 | Maize | golgi | 69.39 | 48.46 |
| Zm00001d033891_P001 | Maize | cytosol, golgi, plasma membrane | 64.63 | 47.15 |
| VIT_12s0035g01710.t01 | Wine grape | golgi | 59.52 | 46.17 |
| VIT_01s0011g03850.t01 | Wine grape | golgi, plastid | 56.12 | 40.74 |
| VIT_14s0066g00820.t01 | Wine grape | cytosol, golgi, mitochondrion, plastid | 39.12 | 35.49 |
| VIT_04s0008g02630.t01 | Wine grape | golgi | 42.86 | 32.23 |
| VIT_10s0116g00980.t01 | Wine grape | golgi | 40.48 | 31.32 |
| VIT_11s0103g00490.t01 | Wine grape | golgi, plastid | 41.5 | 30.27 |
Protein Annotations
| EntrezGene:100266878 | wikigene:100266878 | MapMan:35.1 | ProteinID:CCB59367 | ProteinID:CCB59367.1 | UniProt:F6HY44 |
| EMBL:FN596494 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 | GO:GO:0016020 |
| GO:GO:0016740 | InterPro:Glyco_trans_14 | EntrezGene:LOC100266878 | wikigene:LOC100266878 | PFAM:PF02485 | PANTHER:PTHR31042 |
| PANTHER:PTHR31042:SF54 | UniParc:UPI000210A4D1 | ArrayExpress:VIT_09s0002g02660 | EnsemblPlantsGene:VIT_09s0002g02660 | EnsemblPlants:VIT_09s0002g02660.t01 | RefSeq:XP_002276490 |
| RefSeq:XP_002276490.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr9:+:2422765..2426017
Molecular Weight (calculated)
34132.9 Da
IEP (calculated)
8.339
GRAVY (calculated)
-0.179
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDSELFWRA SFVPGIKNYP FRRIPKIAFM FMTKGPLPLS PLWERFFKGH KGLYSIYVHS LPSYDADFPA SSVFYKRQIP SQVVEWGMMS MCDAERRLLA
101: NALLDIDNEW FILLSESCIP LHNFSIVYRY LSRSRYSFIG AFDEDSPFGR GRYNPNLAPQ VNLTEWRKGS QWFEVNRKLA IDIVGDNTFY PRFKEFCRPS
201: CYVDEHYFQT MLTILAPHLL ANRTTTWVDW SRGGAHPATF GQADITKEFF KKIIEGGTCI YNNQPTSLCF LFARKFAPSA LEPLLDLASE VFGY
101: NALLDIDNEW FILLSESCIP LHNFSIVYRY LSRSRYSFIG AFDEDSPFGR GRYNPNLAPQ VNLTEWRKGS QWFEVNRKLA IDIVGDNTFY PRFKEFCRPS
201: CYVDEHYFQT MLTILAPHLL ANRTTTWVDW SRGGAHPATF GQADITKEFF KKIIEGGTCI YNNQPTSLCF LFARKFAPSA LEPLLDLASE VFGY
001: MGMEEGIKDN AASAPNSRPT NQLKALLPMR VLQVFLLFFV LVLGISVISM HMIKYLKIQT LAPSTLISTY DERITLESLI KPPLNGWHSM NDSELLWRAS
101: MEPRILDYPF KRVPKMAFMF LTKGPLPFAP LWERFFKGHE GFYSIYVHTL PNYRSDFPSS SVFYRRQIPS QHVAWGEMSM CDAERRLLAN ALLDISNEWF
201: VLLSEACIPL RGFNFVYRYV SRSRYSFMGS VDEDGPYGRG RYSYAMGPEV SLNEWRKGSQ WFEINRALAV DIVEDMVYYN KFKEFCRPPC YVDEHYFPTM
301: LSIGYPDFLA NRTLTWTDWS RGGAHPATFG KADITEKFIK KLSRGKACFY NDQPSQVCYL FARKFAPSAL KPLLKLAPKV LGF
101: MEPRILDYPF KRVPKMAFMF LTKGPLPFAP LWERFFKGHE GFYSIYVHTL PNYRSDFPSS SVFYRRQIPS QHVAWGEMSM CDAERRLLAN ALLDISNEWF
201: VLLSEACIPL RGFNFVYRYV SRSRYSFMGS VDEDGPYGRG RYSYAMGPEV SLNEWRKGSQ WFEINRALAV DIVEDMVYYN KFKEFCRPPC YVDEHYFPTM
301: LSIGYPDFLA NRTLTWTDWS RGGAHPATFG KADITEKFIK KLSRGKACFY NDQPSQVCYL FARKFAPSAL KPLLKLAPKV LGF
Arabidopsis Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:TAIR;Acc:AT3G21310]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.