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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, plastid, cytosol

Predictor Summary:
  • nucleus 1
  • plastid 1
  • mitochondrion 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi, plasma membrane, plastid
Any Predictor:golgi, nucleus, plasma membrane, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY51451 Canola golgi 95.54 95.54
AT3G21310.1 Thale cress golgi 81.63 81.2
CDY43927 Canola golgi 72.97 71.47
CDX87842 Canola golgi 72.44 70.95
VIT_09s0002g02660.t01 Wine grape cytosol 50.92 65.99
KRH48972 Soybean cytosol 36.75 65.73
KRH13326 Soybean cytosol 35.7 63.85
KRH47176 Soybean cytosol, golgi, plasma membrane 60.89 59.95
KRH44223 Soybean cytosol, golgi, plasma membrane 60.1 59.17
CDX80552 Canola cytosol 23.62 58.82
EER93518 Sorghum golgi, plasma membrane, plastid 58.27 57.51
Solyc03g121280.2.1 Tomato golgi, nucleus, plasma membrane 58.01 57.4
Zm00001d033892_P001 Maize endoplasmic reticulum, golgi, plasma membrane 54.59 56.99
PGSC0003DMT400006434 Potato golgi, nucleus, plasma membrane 57.22 56.48
CDX78440 Canola cytosol 47.77 56.35
CDX69735 Canola golgi 56.43 55.7
GSMUA_Achr1P14240_001 Banana golgi 52.23 55.59
EER93516 Sorghum golgi 55.38 55.53
CDX97139 Canola golgi 55.64 54.92
CDX97141 Canola golgi 55.64 54.92
Solyc06g062490.2.1 Tomato golgi 53.28 54.86
PGSC0003DMT400012489 Potato golgi 53.54 54.69
TraesCS4D01G061000.1 Wheat golgi, plasma membrane, plastid 56.17 54.59
TraesCS4A01G253400.1 Wheat golgi, plasma membrane, plastid 55.91 54.48
TraesCS4B01G062000.1 Wheat golgi, plasma membrane, plastid 55.91 54.34
GSMUA_Achr3P25730_001 Banana golgi 51.18 54.32
EER93517 Sorghum golgi, mitochondrion, plasma membrane 56.96 53.98
HORVU4Hr1G010270.2 Barley golgi, peroxisome 55.38 52.75
Zm00001d033891_P001 Maize cytosol, golgi, plasma membrane 55.64 52.61
CDX88209 Canola golgi 48.29 52.57
Zm00001d033890_P001 Maize golgi 58.01 52.49
CDX70417 Canola cytosol 41.21 52.33
CDX78439 Canola golgi 53.54 50.87
CDX97140 Canola golgi 54.33 50.49
Os03t0731050-00 Rice plastid 54.59 48.6
CDY31036 Canola golgi 46.98 47.48
CDX70416 Canola golgi 53.81 46.91
CDX94911 Canola golgi 46.72 46.23
CDX93443 Canola golgi 46.19 45.83
CDY20644 Canola golgi 46.46 45.38
CDX96025 Canola golgi, vacuole 48.29 44.23
CDY59035 Canola golgi 47.51 42.99
CDX73016 Canola mitochondrion 39.11 42.94
CDY44904 Canola golgi 45.93 42.68
CDX81507 Canola golgi 45.67 42.44
CDY19328 Canola golgi, mitochondrion 41.99 42.33
CDX96026 Canola golgi 42.78 41.16
CDX70676 Canola cytosol, golgi, nucleus 42.26 40.05
CDY20597 Canola golgi 35.7 40.0
CDX69465 Canola golgi 41.99 39.51
CDX78674 Canola cytosol, golgi, plasma membrane 41.73 39.45
CDY26504 Canola cytosol 15.22 38.16
CDX89388 Canola cytosol 22.31 37.28
CDY49466 Canola cytosol 24.41 36.19
CDX68738 Canola golgi 35.43 35.9
CDY28259 Canola golgi 35.43 35.9
CDY70337 Canola golgi 34.65 35.39
CDX94406 Canola golgi 33.86 34.04
CDX92736 Canola mitochondrion 33.6 33.77
CDY42774 Canola mitochondrion 33.33 33.51
CDY03552 Canola golgi, mitochondrion 34.38 32.67
CDX83505 Canola mitochondrion 33.6 32.16
CDY12850 Canola mitochondrion 33.6 32.16
CDY11878 Canola golgi 32.81 32.13
CDX88613 Canola golgi 32.81 32.13
CDY01412 Canola mitochondrion 33.6 32.08
CDY46724 Canola mitochondrion 33.86 32.01
CDY03361 Canola mitochondrion 33.07 31.9
CDY38285 Canola golgi 32.55 31.88
CDY25922 Canola golgi 32.28 31.62
CDY30178 Canola mitochondrion 33.33 31.59
CDY66853 Canola mitochondrion 32.81 31.57
CDX82625 Canola mitochondrion 32.55 31.39
CDY51089 Canola golgi, mitochondrion 32.55 31.39
CDY24895 Canola mitochondrion 30.71 31.37
CDY31228 Canola golgi 30.45 31.35
CDY08638 Canola mitochondrion 30.71 30.87
CDX69574 Canola mitochondrion 29.4 30.6
CDY09869 Canola mitochondrion 29.4 30.6
CDY66012 Canola mitochondrion 29.13 30.41
CDY57290 Canola cytosol 27.56 30.35
CDY21023 Canola golgi 29.13 29.52
CDY34605 Canola golgi 28.87 29.1
CDY14193 Canola mitochondrion 34.65 25.19
CDY66259 Canola cytosol 26.51 23.49
CDX97918 Canola golgi 38.58 23.3
CDX73017 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:CDY56916EnsemblPlantsGene:GSBRNA2T00020265001GO:A0A078J1C1GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0008375GO:GO:0016020GO:GO:0016021GO:GO:0016740InterPro:Glyco_trans_14PANTHER:PTHR31042
PANTHER:PTHR31042:SF54PFAM:PF02485ProteinID:CDY56916ProteinID:CDY56916.1SEG:segTMHMM:TMhelix
UniParc:UPI0004EE1843UniProt:A0A078J1C1MapMan:35.1:::
Description
BnaCnng31370DBnaCnng31370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J1C1]
Coordinates
chrLK033531:-:4064..5298
Molecular Weight (calculated)
44095.6 Da
IEP (calculated)
8.886
GRAVY (calculated)
-0.152
Length
381 amino acids
Sequence
(BLAST)
001: MGKGEGVKDT SASNLRPTNQ CRSLLPMRVL QVFLMLVVLA LGISVVSMHM IKYLKVQTLA PTTLISTSDE ITTLERFIKP PSSVWHSMND SDLLWLASME
101: PRRYDHPFKR VPKMAFMFLT KGPLPFAPLW ERFFKGHEGF YSIYVHTLPD YKSDVPSSSV FYRRQIPSQH VAWGEMSMCE AERRLLANAL LDISNEWFVL
201: LSEACIPLRG FEFIYNYVSK SIYSFMGSAD EDGPYGRGRY SYAMGPEVQL SQWRKGSQWF EINRELALYI VEDINYYHKF KEFCRPPCYV DEHYFPTMLS
301: IRYSHLLAKR TLTWTDWSKG GPHPTLFGKS VITEMFLKMI QEGQSCLYND QKSQVCYLFA RKFAPSALEP LLKLAPKVLG F
Best Arabidopsis Sequence Match ( AT3G21310.3 )
(BLAST)
001: MGMEEGIKDN AASAPNSRPT NQLKALLPMR VLQVFLLFFV LVLGISVISM HMIKYLKIQT LAPSTLISTY DERITLESLI KPPLNGWHSM NDSELLWRAS
101: MEPRILDYPF KRVPKMAFMF LTKGPLPFAP LWERFFKGHE GFYSIYVHTL PNYRSDFPSS SVFYRRQIPS QHVAWGEMSM CDAERRLLAN ALLDISNEWF
201: VLLSEACIPL RGFNFVYRYV SRSRYSFMGS VDEDGPYGRG RYSYAMGPEV SLNEWRKGSQ WFEINRALAV DIVEDMVYYN KFKEFCRPPC YVDEHYFPTM
301: LSIGYPDFLA NRTLTWTDWS RGGAHPATFG KADITEKFIK KLSRGKACFY NDQPSQVCYL FARKFAPSAL KPLLKLAPKV LGF
Arabidopsis Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:TAIR;Acc:AT3G21310]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.