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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra006114.1-P Field mustard golgi 97.83 88.27
CDX70417 Canola cytosol 79.88 86.0
AT5G11730.1 Thale cress golgi 85.45 71.5
CDX69735 Canola golgi 83.59 69.95
CDX97141 Canola golgi 83.59 69.95
CDX97139 Canola golgi 83.59 69.95
CDX78439 Canola golgi 84.83 68.33
CDX97140 Canola golgi 81.42 64.15
CDX70416 Canola golgi 84.21 62.24
CDX88209 Canola golgi 65.33 60.29
CDX80552 Canola cytosol 27.86 58.82
EER93518 Sorghum golgi, plasma membrane, plastid 63.78 53.37
GSMUA_Achr1P14240_001 Banana golgi 56.97 51.4
TraesCS4A01G253400.1 Wheat golgi, plasma membrane, plastid 61.92 51.15
TraesCS4D01G061000.1 Wheat golgi, plasma membrane, plastid 61.92 51.02
Zm00001d033892_P001 Maize endoplasmic reticulum, golgi, plasma membrane 57.59 50.96
TraesCS4B01G062000.1 Wheat golgi, plasma membrane, plastid 61.61 50.77
HORVU4Hr1G010270.2 Barley golgi, peroxisome 62.23 50.25
EER93517 Sorghum golgi, mitochondrion, plasma membrane 62.23 50.0
GSMUA_Achr3P25730_001 Banana golgi 54.8 49.3
CDY51451 Canola golgi 57.89 49.08
EER93516 Sorghum golgi 57.59 48.95
Zm00001d033891_P001 Maize cytosol, golgi, plasma membrane 60.68 48.64
CDY43927 Canola golgi 57.89 48.07
CDY56916 Canola cytosol, golgi, plasma membrane, plastid 56.35 47.77
CDX87842 Canola golgi 57.28 47.56
Zm00001d033890_P001 Maize golgi 61.92 47.51
Os03t0731050-00 Rice plastid 61.3 46.26
CDX73016 Canola mitochondrion 47.37 44.09
CDY31036 Canola golgi 48.61 41.64
CDX94911 Canola golgi 48.92 41.04
CDX93443 Canola golgi 48.3 40.62
CDY20644 Canola golgi 48.61 40.26
CDY19328 Canola golgi, mitochondrion 46.44 39.68
CDX96025 Canola golgi, vacuole 50.15 38.94
CDY44904 Canola golgi 48.92 38.54
CDX81507 Canola golgi 48.61 38.29
CDY59035 Canola golgi 49.85 38.24
CDX96026 Canola golgi 46.75 38.13
CDX70676 Canola cytosol, golgi, nucleus 47.06 37.81
CDX78674 Canola cytosol, golgi, plasma membrane 47.06 37.72
CDY20597 Canola golgi 39.32 37.35
CDX69465 Canola golgi 46.75 37.28
CDX89388 Canola cytosol 26.01 36.84
CDY49466 Canola cytosol 27.24 34.24
CDX92736 Canola mitochondrion 38.7 32.98
CDX68738 Canola golgi 38.39 32.98
CDY28259 Canola golgi 38.39 32.98
CDX88613 Canola golgi 39.63 32.9
CDY11878 Canola golgi 39.63 32.9
CDX94406 Canola golgi 38.39 32.72
CDY42774 Canola mitochondrion 38.39 32.72
CDY70337 Canola golgi 37.15 32.17
CDX83505 Canola mitochondrion 39.32 31.91
CDY12850 Canola mitochondrion 39.32 31.91
CDY38285 Canola golgi 38.39 31.88
CDY01412 Canola mitochondrion 39.32 31.83
CDY25922 Canola golgi 38.08 31.62
CDY46724 Canola mitochondrion 39.32 31.51
CDY03361 Canola mitochondrion 38.08 31.14
CDY30178 Canola mitochondrion 38.7 31.09
CDY03552 Canola golgi, mitochondrion 38.39 30.92
CDY66853 Canola mitochondrion 37.77 30.81
CDX82625 Canola mitochondrion 37.46 30.63
CDY57290 Canola cytosol 32.51 30.35
CDY51089 Canola golgi, mitochondrion 36.84 30.13
CDY26504 Canola cytosol 13.93 29.61
CDY66012 Canola mitochondrion 33.13 29.32
CDX69574 Canola mitochondrion 32.51 28.69
CDY24895 Canola mitochondrion 33.13 28.69
CDY08638 Canola mitochondrion 33.44 28.5
CDY09869 Canola mitochondrion 32.2 28.42
CDY34605 Canola golgi 33.13 28.31
CDY31228 Canola golgi 31.27 27.3
CDY21023 Canola golgi 30.65 26.33
CDY14193 Canola mitochondrion 38.7 23.86
CDX97918 Canola golgi 44.58 22.82
CDX73017 Canola cytosol 0.93 21.43
CDY66259 Canola cytosol 27.86 20.93
Protein Annotations
EnsemblPlants:CDX78440EnsemblPlantsGene:GSBRNA2T00129827001GO:A0A078CNK6GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0008375GO:GO:0016020GO:GO:0016740InterPro:Glyco_trans_14PANTHER:PTHR31042PANTHER:PTHR31042:SF54
PFAM:PF02485ProteinID:CDX78440ProteinID:CDX78440.1SEG:segUniParc:UPI0004EEADDBMapMan:35.1
Description
BnaA03g03520D
Coordinates
chrLK031815:+:801829..803174
Molecular Weight (calculated)
37322.8 Da
IEP (calculated)
8.455
GRAVY (calculated)
-0.372
Length
323 amino acids
Sequence
(BLAST)
001: MRSMVVQLEE GKENGISVRT EHVVTTVTSS FVPRREEEPD GLSKWIQPPG VLMHNMSDEE LLWRASFWPR RKGYPFKRVP KIAFMFLTRG PLPLASLWER
101: FLKGHKGLYS VYIHPHPSYT AKFPADSVFY QRQIPSQLAQ WGRMNMCEAE RRLLANALLD ISNEWFVLVS ESCIPLFNFT TIYTYLSQSK HSFMDAFDDN
201: GPFGRGRYNE NMEPEVPIAK WRKGSQWPAC FSDEHYLPTM LTIEKPMALA NRSMTWTDWS RGGSHPATFG ESDITENFFQ KIFDGVNCTY NGRNTSMCYL
301: FARKFAPSAL EPLLHIAPKI MGF
Best Arabidopsis Sequence Match ( AT3G21310.3 )
(BLAST)
001: MGMEEGIKDN AASAPNSRPT NQLKALLPMR VLQVFLLFFV LVLGISVISM HMIKYLKIQT LAPSTLISTY DERITLESLI KPPLNGWHSM NDSELLWRAS
101: MEPRILDYPF KRVPKMAFMF LTKGPLPFAP LWERFFKGHE GFYSIYVHTL PNYRSDFPSS SVFYRRQIPS QHVAWGEMSM CDAERRLLAN ALLDISNEWF
201: VLLSEACIPL RGFNFVYRYV SRSRYSFMGS VDEDGPYGRG RYSYAMGPEV SLNEWRKGSQ WFEINRALAV DIVEDMVYYN KFKEFCRPPC YVDEHYFPTM
301: LSIGYPDFLA NRTLTWTDWS RGGAHPATFG KADITEKFIK KLSRGKACFY NDQPSQVCYL FARKFAPSAL KPLLKLAPKV LGF
Arabidopsis Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:TAIR;Acc:AT3G21310]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.