CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
mitochondrion 1
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, golgi, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006113.1-P	Field mustard	golgi	93.02	96.63
CDX70416	Canola	golgi	94.51	86.73
AT5G11730.1	Thale cress	golgi	82.04	85.23
CDX78440	Canola	cytosol	68.33	84.83
CDX97141	Canola	golgi	80.55	83.68
CDX69735	Canola	golgi	80.3	83.42
CDX97139	Canola	golgi	80.3	83.42
CDX70417	Canola	cytosol	59.35	79.33
CDX97140	Canola	golgi	78.55	76.83
CDX88209	Canola	golgi	60.35	69.14
CDX80552	Canola	cytosol	26.18	68.63
EER93518	Sorghum	golgi, plasma membrane, plastid	56.61	58.81
GSMUA_Achr1P14240_001	Banana	golgi	52.12	58.38
TraesCS4A01G253400.1	Wheat	golgi, plasma membrane, plastid	56.11	57.54
Zm00001d033892_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	52.37	57.53
TraesCS4D01G061000.1	Wheat	golgi, plasma membrane, plastid	55.86	57.14
GSMUA_Achr3P25730_001	Banana	golgi	51.12	57.1
TraesCS4B01G062000.1	Wheat	golgi, plasma membrane, plastid	55.61	56.89
EER93517	Sorghum	golgi, mitochondrion, plasma membrane	56.36	56.22
HORVU4Hr1G010270.2	Barley	golgi, peroxisome	55.61	55.75
EER93516	Sorghum	golgi	52.37	55.26
CDY51451	Canola	golgi	51.87	54.59
Zm00001d033891_P001	Maize	cytosol, golgi, plasma membrane	54.86	54.59
CDY43927	Canola	golgi	52.62	54.24
CDX87842	Canola	golgi	52.12	53.73
CDY56916	Canola	cytosol, golgi, plasma membrane, plastid	50.87	53.54
Zm00001d033890_P001	Maize	golgi	55.61	52.97
Os03t0731050-00	Rice	plastid	54.36	50.93
CDY31036	Canola	golgi	43.14	45.89
CDX73016	Canola	mitochondrion	39.65	45.82
CDX94911	Canola	golgi	43.39	45.19
CDY19328	Canola	golgi, mitochondrion	42.39	44.97
CDX93443	Canola	golgi	42.89	44.79
CDY20644	Canola	golgi	42.89	44.1
CDX78674	Canola	cytosol, golgi, plasma membrane	43.39	43.18
CDX96025	Canola	golgi, vacuole	44.64	43.03
CDX69465	Canola	golgi	43.39	42.96
CDX70676	Canola	cytosol, golgi, nucleus	42.89	42.79
CDX81507	Canola	golgi	43.64	42.68
CDY44904	Canola	golgi	43.64	42.68
CDY20597	Canola	golgi	35.91	42.35
CDY59035	Canola	golgi	44.39	42.28
CDX89388	Canola	cytosol	23.94	42.11
CDX96026	Canola	golgi	41.4	41.92
CDY26504	Canola	cytosol	14.46	38.16
CDY49466	Canola	cytosol	23.69	36.97
CDX92736	Canola	mitochondrion	34.91	36.94
CDY42774	Canola	mitochondrion	34.66	36.68
CDX94406	Canola	golgi	34.66	36.68
CDX88613	Canola	golgi	34.91	35.99
CDY11878	Canola	golgi	34.91	35.99
CDY70337	Canola	golgi	33.42	35.92
CDX68738	Canola	golgi	33.67	35.9
CDY28259	Canola	golgi	33.67	35.9
CDY38285	Canola	golgi	34.41	35.48
CDY25922	Canola	golgi	34.16	35.22
CDY03361	Canola	mitochondrion	33.92	34.43
CDY66853	Canola	mitochondrion	33.67	34.09
CDX83505	Canola	mitochondrion	33.67	33.92
CDY12850	Canola	mitochondrion	33.67	33.92
CDY01412	Canola	mitochondrion	33.67	33.83
CDY46724	Canola	mitochondrion	33.92	33.75
CDY30178	Canola	mitochondrion	33.42	33.33
CDY03552	Canola	golgi, mitochondrion	32.67	32.67
CDX82625	Canola	mitochondrion	31.92	32.41
CDY51089	Canola	golgi, mitochondrion	31.67	32.15
CDY66012	Canola	mitochondrion	29.18	32.05
CDY08638	Canola	mitochondrion	29.68	31.4
CDY24895	Canola	mitochondrion	29.18	31.37
CDY57290	Canola	cytosol	26.93	31.21
CDX69574	Canola	mitochondrion	28.43	31.15
CDY09869	Canola	mitochondrion	28.18	30.87
CDY34605	Canola	golgi	27.93	29.63
CDY31228	Canola	golgi	27.18	29.46
CDY21023	Canola	golgi	26.68	28.46
CDX97918	Canola	golgi	41.15	26.15
CDY14193	Canola	mitochondrion	33.17	25.38
CDY66259	Canola	cytosol	25.19	23.49
CDX73017	Canola	cytosol	0.25	7.14

Protein Annotations

EnsemblPlants:CDX78439	EnsemblPlantsGene:GSBRNA2T00129826001	GO:A0A078CQR8	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF54
PFAM:PF02485	ProteinID:CDX78439	ProteinID:CDX78439.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EE829A
MapMan:35.1	:	:	:	:	:

Description

BnaA03g03510D

Coordinates

chrLK031815:+:799011..801739

Molecular Weight (calculated)

45775.2 Da

IEP (calculated)

9.237

GRAVY (calculated)

-0.240

Length

401 amino acids

Sequence
(BLAST)

001: MQTISRVLQE GKENGILVRT GQYKSFRPKL LLLLGLFLAV LVTIFIISVS TINSTGLHSV VTTVTSTFVP CREDEPNSLG KWIQPPTVLM HNMTDEELLW
101: RASLWPRRKG YPFKRVPKIA FMFLTKGPLP LASLWERFLK GHKGLYSVYV HPDPSFNAKF PADSVFYKRQ IPSQQVAEWG RMTMCDAEKR LLANALLDIS
201: NEWFVLVSES CIPLYNFTTI YTYLSQSKHS FIGAVDDPGP FGRGRYNDNM EPEVPITKWR KGPQWFELDR DLAATIVKDA LYHHKFREFC RPACYSDEHY
301: FPTMLTIEKP TALANRSVTW TDWSRGGPHP ATFGRSDITE EFFGKIFDGE NCSYNGRNTS MCYLFARKFA PSALEPLLHI APKIMGGNGN ITRTQLPSFN
401: S

Best Arabidopsis Sequence Match ( AT5G11730.1 )
(BLAST)

001: MQNRIVQLEE GKENGITVRS GHYKGFPSKL LLLLGLFLTF SVTVFIISVS TIKYTGIQSV VTTVTSSFVP CREGEPNSLS KWIQPPAVLM HNMSDEELLW
101: RASFWPRRKE YPFKRVPKVA FMFLTKGPLP LASLWERFLK GHKGLYSVYL HPHPSFTAKF PASSVFHRRQ IPSQVAEWGR MSMCDAEKRL LANALLDVSN
201: EWFVLVSESC IPLYNFTTIY SYLSRSKHSF MGAFDDPGPF GRGRYNGNME PEVPLTKWRK GSQWFEVNRD LAATIVKDTL YYPKFKEFCR PACYVDEHYF
301: PTMLTIEKPT VLANRSLTWV DWSRGGPHPA TFGRSDITEN FFGKIFDGRN CSYNGRNTSM CYLFARKFAP SALEPLLHIA PKILGF

Arabidopsis Description

At5g11730 [Source:UniProtKB/TrEMBL;Acc:Q9LYF7]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.