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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • nucleus 1
  • golgi 3
  • extracellular 1
  • plasma membrane 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:golgi, nucleus, plastid
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY31036 Canola golgi 93.33 96.55
CDX93443 Canola golgi 91.03 92.45
CDX94911 Canola golgi 90.26 91.43
AT1G10280.1 Thale cress golgi 90.51 85.68
GSMUA_Achr7P23520_001 Banana cytosol 54.1 71.53
GSMUA_Achr8P29190_001 Banana cytosol 45.13 64.47
VIT_12s0035g01710.t01 Wine grape golgi 62.31 64.12
KRH26270 Soybean golgi 61.28 62.4
KRH06031 Soybean golgi, plasma membrane, plastid 62.82 62.18
PGSC0003DMT400063986 Potato golgi 60.51 59.45
Solyc01g103150.2.1 Tomato golgi 60.26 59.19
GSMUA_Achr5P01370_001 Banana golgi 54.87 58.47
GSMUA_Achr8P08460_001 Banana golgi 53.33 57.3
TraesCS7D01G317600.1 Wheat cytosol, golgi, peroxisome 56.92 54.81
Os08t0110400-01 Rice cytosol, golgi, peroxisome 57.18 54.79
GSMUA_Achr8P32350_001 Banana golgi, mitochondrion 55.9 54.77
TraesCS7A01G320800.1 Wheat cytosol, golgi, peroxisome 56.67 54.57
TraesCS7B01G221700.1 Wheat cytosol, golgi, peroxisome 56.41 54.32
EES14395 Sorghum endoplasmic reticulum, golgi, plastid 56.67 53.64
HORVU7Hr1G076790.5 Barley golgi 55.9 53.3
Zm00001d035039_P001 Maize plasma membrane 56.41 53.14
CDX80552 Canola cytosol 20.51 52.29
Os04t0272400-01 Rice golgi, nucleus, peroxisome 54.36 51.46
TraesCS2D01G566600.1 Wheat cytosol, golgi, plasma membrane 54.36 50.96
TraesCS2B01G616400.1 Wheat golgi 54.36 50.72
HORVU2Hr1G127680.1 Barley cytosol, golgi, plasma membrane 53.33 49.88
TraesCSU01G137600.1 Wheat cytosol, golgi, plasma membrane 54.1 49.41
CDX78440 Canola cytosol 40.26 48.61
CDY51451 Canola golgi 46.41 47.51
Zm00001d026711_P001 Maize cytosol, golgi, plasma membrane 52.31 46.68
EES11719 Sorghum golgi, mitochondrion, peroxisome 53.33 46.64
CDY56916 Canola cytosol, golgi, plasma membrane, plastid 45.38 46.46
CDX97139 Canola golgi 45.38 45.85
CDX97141 Canola golgi 45.38 45.85
CDY43927 Canola golgi 45.38 45.5
CDX87842 Canola golgi 45.38 45.5
CDX69735 Canola golgi 44.62 45.08
CDX70417 Canola cytosol 34.62 45.0
CDX96025 Canola golgi, vacuole 47.44 44.47
CDX88209 Canola golgi 39.74 44.29
CDY44904 Canola golgi 45.9 43.66
CDY19328 Canola golgi, mitochondrion 42.31 43.65
CDX81507 Canola golgi 45.64 43.41
CDY59035 Canola golgi 46.67 43.23
CDX73016 Canola mitochondrion 38.46 43.23
CDX97140 Canola golgi 45.38 43.17
CDX96026 Canola golgi 43.59 42.93
CDX78439 Canola golgi 44.1 42.89
CDX70676 Canola cytosol, golgi, nucleus 43.33 42.04
CDX78674 Canola cytosol, golgi, plasma membrane 43.08 41.69
CDX69465 Canola golgi 43.08 41.48
CDY26504 Canola cytosol 15.9 40.79
CDX89388 Canola cytosol 23.85 40.79
CDY20597 Canola golgi 34.87 40.0
CDX70416 Canola golgi 44.36 39.59
CDY70337 Canola golgi 36.67 38.34
CDY49466 Canola cytosol 24.87 37.74
CDX68738 Canola golgi 35.13 36.44
CDY28259 Canola golgi 35.13 36.44
CDX94406 Canola golgi 32.82 33.77
CDY46724 Canola mitochondrion 34.36 33.25
CDX92736 Canola mitochondrion 32.31 33.25
CDY38285 Canola golgi 33.08 33.16
CDX88613 Canola golgi 33.08 33.16
CDY11878 Canola golgi 33.08 33.16
CDY30178 Canola mitochondrion 34.1 33.08
CDY42774 Canola mitochondrion 32.05 32.98
CDY25922 Canola golgi 32.82 32.9
CDX69574 Canola mitochondrion 30.51 32.51
CDY51089 Canola golgi, mitochondrion 32.82 32.41
CDX82625 Canola mitochondrion 32.82 32.41
CDY09869 Canola mitochondrion 30.26 32.24
CDY24895 Canola mitochondrion 30.77 32.17
CDY31228 Canola golgi 30.51 32.16
CDY08638 Canola mitochondrion 31.03 31.93
CDY66853 Canola mitochondrion 32.31 31.82
CDY03361 Canola mitochondrion 32.05 31.65
CDY57290 Canola cytosol 27.95 31.5
CDY34605 Canola golgi 30.51 31.48
CDY21023 Canola golgi 30.26 31.38
CDY03552 Canola golgi, mitochondrion 32.05 31.17
CDX83505 Canola mitochondrion 31.54 30.9
CDY12850 Canola mitochondrion 31.54 30.9
CDY01412 Canola mitochondrion 31.54 30.83
CDY66012 Canola mitochondrion 28.72 30.68
CDX97918 Canola golgi 40.0 24.72
CDY14193 Canola mitochondrion 32.56 24.24
CDY66259 Canola cytosol 26.67 24.19
CDX73017 Canola cytosol 0.51 14.29
Protein Annotations
MapMan:35.1GO:A0A078G5L2UniProt:A0A078G5L2EnsemblPlants:CDY20644ProteinID:CDY20644ProteinID:CDY20644.1
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0008375GO:GO:0016020GO:GO:0016021
GO:GO:0016740EnsemblPlantsGene:GSBRNA2T00012827001InterPro:Glyco_trans_14PFAM:PF02485PANTHER:PTHR31042PANTHER:PTHR31042:SF3
TMHMM:TMhelixUniParc:UPI0004EEC533SEG:seg:::
Description
BnaC08g14140DBnaC08g14140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G5L2]
Coordinates
chrLK032110:+:430774..433217
Molecular Weight (calculated)
44721.4 Da
IEP (calculated)
7.489
GRAVY (calculated)
-0.235
Length
390 amino acids
Sequence
(BLAST)
001: MARVRAGEKE EGLEKHIGLL KLAQTLSFLL IFMAGIIIGL AASSHIDRYF NSLPQMLSSS SSSASLQTIP DYSNCTIRDC WSVDGFVRPE EVRHRMSDDE
101: LFWRASMVPV KEEYPYDRVP KVAFMFLARG PLPMLPLWEK FFRGNEKYLS VYVHTPPGYD MNVSSDSPFY DRQVPSQKVA WGSPLLTDAE KRLLANALLD
201: FSNERFVLLS ESCVPVYNFT TVYSYLINSA YSFVDSYDEP TRYGRGRYSR KMLPDIKLHN WRKGSQWFEV NRKIAIYIIS DSKYYSLFKQ YCRPACYPDE
301: HYIPTLLNMF HGSVNANRSV TWVDWSIGGP HPATYGADNI TEGFLQSIRK NETDCLYNEE PTSLCFLFAR KFAPSALAPL MNLSSTVMGF
Best Arabidopsis Sequence Match ( AT1G10280.1 )
(BLAST)
001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF
Arabidopsis Description
At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.