Factsheet for Zm00001d035039_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

golgi 1
mitochondrion 1
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, mitochondrion, plastid
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14395	Sorghum	endoplasmic reticulum, golgi, plastid	95.65	96.12
TraesCS7D01G317600.1	Wheat	cytosol, golgi, peroxisome	84.3	86.17
TraesCS7A01G320800.1	Wheat	cytosol, golgi, peroxisome	83.82	85.68
TraesCS7B01G221700.1	Wheat	cytosol, golgi, peroxisome	83.33	85.19
Os08t0110400-01	Rice	cytosol, golgi, peroxisome	81.16	82.56
HORVU7Hr1G076790.5	Barley	golgi	81.4	82.4
GSMUA_Achr8P32350_001	Banana	golgi, mitochondrion	60.14	62.56
Zm00001d026711_P001	Maize	cytosol, golgi, plasma membrane	63.28	59.95
VIT_12s0035g01710.t01	Wine grape	golgi	53.14	58.05
CDY31036	Canola	golgi	52.42	57.56
CDX93443	Canola	golgi	53.38	57.55
CDX94911	Canola	golgi	52.9	56.88
PGSC0003DMT400063986	Potato	golgi	54.35	56.68
KRH26270	Soybean	golgi	52.42	56.66
CDY20644	Canola	golgi	53.14	56.41
Solyc01g103150.2.1	Tomato	golgi	53.38	55.67
KRH06031	Soybean	golgi, plasma membrane, plastid	52.66	55.33
Bra018450.1-P	Field mustard	golgi	53.38	54.7
Bra019951.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	54.59	54.59
AT1G10280.1	Thale cress	golgi	53.86	54.13
Zm00001d042652_P001	Maize	golgi, peroxisome, vacuole	51.69	49.77
Zm00001d033892_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	42.03	47.67
Zm00001d033891_P001	Maize	cytosol, golgi, plasma membrane	44.69	45.91
Zm00001d033890_P001	Maize	golgi	43.48	42.76
Zm00001d039970_P001	Maize	plastid	37.44	42.01
Zm00001d041221_P001	Maize	golgi, mitochondrion, plasma membrane, plastid	39.61	41.41
Zm00001d031187_P002	Maize	plastid	39.61	41.21
Zm00001d008568_P001	Maize	golgi	37.2	40.0
Zm00001d039969_P001	Maize	plasma membrane	38.16	39.21
Zm00001d036482_P001	Maize	plasma membrane	34.06	37.7
Zm00001d024348_P002	Maize	mitochondrion	33.33	37.3
Zm00001d053393_P002	Maize	golgi, plastid	39.86	36.75
Zm00001d014668_P001	Maize	plasma membrane	32.85	36.56
Zm00001d016103_P001	Maize	golgi, plasma membrane, plastid	38.89	36.1
Zm00001d002382_P002	Maize	golgi, mitochondrion	32.61	34.88
Zm00001d015429_P004	Maize	golgi	31.64	34.75
Zm00001d053763_P001	Maize	golgi	32.13	34.28
Zm00001d026261_P001	Maize	golgi, mitochondrion	31.4	33.94
Zm00001d036668_P004	Maize	plasma membrane	30.92	33.86
Zm00001d046936_P002	Maize	golgi	29.95	31.23
Zm00001d043768_P001	Maize	golgi, mitochondrion, plastid	28.5	30.18
Zm00001d009810_P003	Maize	mitochondrion, vacuole	28.5	22.22

Protein Annotations

EntrezGene:100275738	MapMan:35.1	ProteinID:AQK78157.1	UniProt:B6SYK4	EMBL:BT061103	EMBL:BT063502
EMBL:EU957819	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_14	PFAM:PF02485	PANTHER:PTHR31042
PANTHER:PTHR31042:SF3	TMHMM:TMhelix	UniParc:UPI000182CCC6	EnsemblPlantsGene:Zm00001d035039	EnsemblPlants:Zm00001d035039_P001	EnsemblPlants:Zm00001d035039_T001
SEG:seg	:	:	:	:	:

Description

Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein

Coordinates

chr6:-:2915191..2918505

Molecular Weight (calculated)

47056.9 Da

IEP (calculated)

8.009

GRAVY (calculated)

-0.225

Length

414 amino acids

Sequence
(BLAST)

001: MWGGDSNAKQ MLKSRGGTGV VGGLPAAGDE ESDYFPPTPR KDYWWSTGLL KLVTATVIFM GGVVLGLSVS GSVARYYYNA SHAELFFPAT TYGCDPRDRD
101: CGMGLAFRAF VHPPRLAHSM TDDELFWRAS LVPRAEEFPF QRVPKVAFLF MARGPIPFAP LWDKFFRGHQ GLYSVYVHTV PDYKLNVSKS SAFYGRQIPS
201: EEVSWGSITL VDAEKRLLAN ALLDFSNERF VLLSESCIPV FNFPTVYEYL INSAHSFVES YNIDTPQCAG RYNRRMAPHI MADQWRKGSE WFELNRELAV
301: QIVADYKYYS IFRKHCRPSC YPDEHYIPTY LHLFHGPLNA NRTITWVDWS RGGPHPASYG ATDITEDFIQ AIRNNGTQCF YNSKPTSVCY LFARKFAPNA
401: LPRLMNLTST VLDF

Best Arabidopsis Sequence Match ( AT1G10280.1 )
(BLAST)

001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF

Arabidopsis Description

At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.