Factsheet for Zm00001d039970_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02543	Sorghum	golgi	89.16	82.87
Zm00001d039969_P001	Maize	plasma membrane	68.02	62.28
Zm00001d008568_P001	Maize	golgi	60.98	58.44
Zm00001d033892_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	41.19	41.64
Zm00001d031187_P002	Maize	plastid	43.63	40.45
Zm00001d041221_P001	Maize	golgi, mitochondrion, plasma membrane, plastid	42.82	39.9
Zm00001d033891_P001	Maize	cytosol, golgi, plasma membrane	42.55	38.96
Zm00001d035039_P001	Maize	plasma membrane	42.01	37.44
Zm00001d042652_P001	Maize	golgi, peroxisome, vacuole	43.09	36.98
Zm00001d033890_P001	Maize	golgi	41.73	36.58
Zm00001d026711_P001	Maize	cytosol, golgi, plasma membrane	42.55	35.93
Zm00001d053393_P002	Maize	golgi, plastid	42.01	34.52
Zm00001d016103_P001	Maize	golgi, plasma membrane, plastid	41.46	34.3
Zm00001d024348_P002	Maize	mitochondrion	33.88	33.78
Zm00001d015429_P004	Maize	golgi	33.33	32.63
Zm00001d036482_P001	Maize	plasma membrane	32.79	32.35
Zm00001d053763_P001	Maize	golgi	33.6	31.96
Zm00001d036668_P004	Maize	plasma membrane	32.52	31.75
Zm00001d014668_P001	Maize	plasma membrane	31.98	31.72
Zm00001d026261_P001	Maize	golgi, mitochondrion	32.25	31.07
Zm00001d002382_P002	Maize	golgi, mitochondrion	32.52	31.01
Zm00001d046936_P002	Maize	golgi	30.62	28.46
Zm00001d043768_P001	Maize	golgi, mitochondrion, plastid	29.54	27.88
Zm00001d009810_P003	Maize	mitochondrion, vacuole	29.27	20.34

Protein Annotations

EnsemblPlants:Zm00001d039970_P001	EnsemblPlants:Zm00001d039970_T001	EnsemblPlantsGene:Zm00001d039970	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF26	PFAM:PF02485	ProteinID:ONM30226.1	SEG:seg	UniParc:UPI00084520B3	UniProt:A0A1D6MLY8
MapMan:35.1	:	:	:	:	:

Description

Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein

Coordinates

chr3:-:21117028..21118234

Molecular Weight (calculated)

41844.3 Da

IEP (calculated)

8.355

GRAVY (calculated)

-0.299

Length

369 amino acids

Sequence
(BLAST)

001: MASISKFPNM IYTPFVASLP FPTPPPPPPT PSPPRPPPLP ATPLLPAPRN LGRMGLMDLL APSGVIHNMT DEELFWRASM APKGHRTPYH RVPKIAFLFL
101: VRGELPLRPL WEKFFAGNDQ ELYSIYVHPD PSYTGSPPRD SVFYGRMIPS KETKWGHVSL VEAESRLLAS ALLDHSNERF VLLSEACIPV YNFSTVYAFL
201: AGSATSFVDS YGNGDCRARY DRFFAERTNI TIEHWRKGAQ WFEMDRALAL EVVGDEPYIQ MFRDFCVGRW RCLTDEHYLP TLLNLLGWAR NANRSLTYAD
301: WKRPQGMHPH THDGAEVTEE LLNRIREDGG NRCFYNGARA GICSLFARKF SPDTLQPLLR LAPKVMGFG

Best Arabidopsis Sequence Match ( AT1G10280.1 )
(BLAST)

001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF

Arabidopsis Description

At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.