Factsheet for Zm00001d039969_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 3
golgi 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

plasma membrane: 23508561
plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02542	Sorghum	golgi	93.55	92.86
Os10t0165000-01	Rice	golgi	72.21	72.03
Zm00001d039970_P001	Maize	plastid	62.28	68.02
Zm00001d008568_P001	Maize	golgi	57.57	60.26
Zm00001d033892_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	39.95	44.11
Zm00001d031187_P002	Maize	plastid	41.69	42.21
Zm00001d041221_P001	Maize	golgi, mitochondrion, plasma membrane, plastid	41.19	41.92
Zm00001d042652_P001	Maize	golgi, peroxisome, vacuole	43.42	40.7
Zm00001d033891_P001	Maize	cytosol, golgi, plasma membrane	39.95	39.95
Zm00001d033890_P001	Maize	golgi	40.94	39.19
Zm00001d035039_P001	Maize	plasma membrane	39.21	38.16
Zm00001d026711_P001	Maize	cytosol, golgi, plasma membrane	39.45	36.38
Zm00001d053393_P002	Maize	golgi, plastid	39.45	35.41
Zm00001d016103_P001	Maize	golgi, plasma membrane, plastid	38.21	34.53
Zm00001d024348_P002	Maize	mitochondrion	30.77	33.51
Zm00001d002382_P002	Maize	golgi, mitochondrion	32.01	33.33
Zm00001d026261_P001	Maize	golgi, mitochondrion	31.02	32.64
Zm00001d036668_P004	Maize	plasma membrane	30.02	32.01
Zm00001d053763_P001	Maize	golgi	30.52	31.7
Zm00001d015429_P004	Maize	golgi	29.53	31.57
Zm00001d036482_P001	Maize	plasma membrane	29.28	31.55
Zm00001d014668_P001	Maize	plasma membrane	28.78	31.18
Zm00001d043768_P001	Maize	golgi, mitochondrion, plastid	28.78	29.67
Zm00001d046936_P002	Maize	golgi	29.03	29.47
Zm00001d009810_P003	Maize	mitochondrion, vacuole	28.54	21.66

Protein Annotations

EnsemblPlants:Zm00001d039969_P001	EnsemblPlants:Zm00001d039969_T001	EnsemblPlantsGene:Zm00001d039969	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_14
PANTHER:PTHR31042	PANTHER:PTHR31042:SF26	PFAM:PF02485	ProteinID:ONM30225.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI0002212C0C	UniProt:A0A1D6MLY7	MapMan:35.1	:	:	:

Description

Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein

Coordinates

chr3:-:21077618..21079197

Molecular Weight (calculated)

45426.5 Da

IEP (calculated)

9.871

GRAVY (calculated)

-0.331

Length

403 amino acids

Sequence
(BLAST)

001: MKDTKKPTRA SSRLGGRVVG VASMLLFVSL GFVLGVTSSN AMFIRYYLPF MPPLRSSAAP SSSPPPLTTP LTPSQTPPPP PPLPQNPQLR SAGFLSPSGV
101: MHNMTDEELY WRASMAPMVR RTPDSRVPKV AFLFLVRGEL PLRPLWEKFF AGHEGRYSIY VHAHPSYTGS PPTDSPFYGR YIPSQITKWG DASLVEAERR
201: LLANALLDLG NERFALFSEA CIPVYDFPTV HAFLTGSDTS FVDCYENGGS RSRYRPFFAT RNITLARWRK GAQWFEMDRA LALESVADGS CFPAFRDFCV
301: GRRECLIDEH YLPTLVSLLG WGRRNANRTL TYADWKRPVN RHPHTHGPDE VTEERIREIR EEGGRRCFYN GARRGICNLF ARKFSPDTLE PLLRLAPKVM
401: GFG

Best Arabidopsis Sequence Match ( AT1G51770.1 )
(BLAST)

001: MKVMVMEMEE CVKENGSSTP KSRVTNQSRA LLPLRLLQIL LLFLVLTLGI SVVSIHMIKF LKIQRLDPVA PITLLSTYNH ESVTLDSFIR PPSNVWHTMN
101: DSELLWRASI EPQRNGYPFR RVPKLAFMFL AKGPLPFAPL WEKFCKGHEG LYSIYVHSLP SYKSDFSRSS VFYRRYIPSQ AVAWGEMSMG EAERRLLANA
201: LLDISNEWFV LLSESCIPLR GFSFIYSYVS ESRYSFMGAA DEEGPDGRGR YRTEMEPEIT LSQWRKGSQW FEINRKLAVE IVQDTTYYPK FKEFCRPPCY
301: VDEHYFPTML SMKHRVLLAN RTLTWTDWSR GGAHPATFGK ADVTESFLKK LTGAKSCLYN DHQSQICYLF ARKFAPSALE PLLQLAPKIL ELGSNISSTR
401: HSWYLF

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q1G300]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.