Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d015429_P004 | Maize | golgi | 92.27 | 94.96 |
| Os02t0175500-01 | Rice | golgi | 89.95 | 89.49 |
| TraesCS6D01G143800.1 | Wheat | golgi | 82.99 | 82.56 |
| TraesCS6A01G154200.1 | Wheat | golgi | 82.73 | 82.31 |
| TraesCS6B01G181900.1 | Wheat | golgi | 82.47 | 82.05 |
| HORVU6Hr1G030990.4 | Barley | golgi | 82.22 | 81.79 |
| Zm00001d036668_P004 | Maize | plasma membrane | 77.84 | 79.89 |
| GSMUA_Achr7P08690_001 | Banana | endoplasmic reticulum, golgi | 56.96 | 74.66 |
| Zm00001d046936_P002 | Maize | golgi | 74.74 | 73.05 |
| GSMUA_Achr11P... | Banana | cytosol | 53.61 | 71.48 |
| GSMUA_Achr4P05750_001 | Banana | golgi | 70.1 | 69.57 |
| GSMUA_Achr4P12520_001 | Banana | golgi | 68.81 | 68.29 |
| Zm00001d026261_P001 | Maize | golgi, mitochondrion | 65.21 | 66.06 |
| Zm00001d002382_P002 | Maize | golgi, mitochondrion | 65.21 | 65.37 |
| Zm00001d014668_P001 | Maize | plasma membrane | 60.82 | 63.44 |
| Zm00001d036482_P001 | Maize | plasma membrane | 61.08 | 63.37 |
| Zm00001d024348_P002 | Maize | mitochondrion | 60.05 | 62.97 |
| Zm00001d033892_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 33.51 | 35.62 |
| Zm00001d041221_P001 | Maize | golgi, mitochondrion, plasma membrane, plastid | 35.82 | 35.1 |
| Zm00001d031187_P002 | Maize | plastid | 35.82 | 34.92 |
| Zm00001d033891_P001 | Maize | cytosol, golgi, plasma membrane | 35.57 | 34.24 |
| Zm00001d033890_P001 | Maize | golgi | 36.86 | 33.97 |
| Zm00001d039970_P001 | Maize | plastid | 31.96 | 33.6 |
| Zm00001d035039_P001 | Maize | plasma membrane | 34.28 | 32.13 |
| Zm00001d008568_P001 | Maize | golgi | 31.44 | 31.69 |
| Zm00001d026711_P001 | Maize | cytosol, golgi, plasma membrane | 35.31 | 31.35 |
| Zm00001d039969_P001 | Maize | plasma membrane | 31.7 | 30.52 |
| Zm00001d042652_P001 | Maize | golgi, peroxisome, vacuole | 33.51 | 30.23 |
| Zm00001d016103_P001 | Maize | golgi, plasma membrane, plastid | 32.73 | 28.48 |
| Zm00001d053393_P002 | Maize | golgi, plastid | 32.22 | 27.84 |
| Zm00001d043768_P001 | Maize | golgi, mitochondrion, plastid | 27.32 | 27.11 |
| Zm00001d009810_P003 | Maize | mitochondrion, vacuole | 29.12 | 21.28 |
Protein Annotations
| EMBL:BT043150 | EnsemblPlants:Zm00001d053763_P001 | EnsemblPlants:Zm00001d053763_T001 | EnsemblPlantsGene:Zm00001d053763 | EntrezGene:100274672 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 | GO:GO:0016020 | GO:GO:0016740 | GO:GO:0016757 |
| InterPro:Glyco_trans_14 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF19 | PFAM:PF02485 | ProteinID:AQK60300.1 | ProteinID:AQK60301.1 |
| TMHMM:TMhelix | UniParc:UPI00017B813E | UniProt:B4G1B2 | MapMan:35.1 | : | : |
Description
Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein
Coordinates
chr4:-:240654631..240663761
Molecular Weight (calculated)
44794.1 Da
IEP (calculated)
8.713
GRAVY (calculated)
-0.175
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MKQVWGRSSK DMTTMPPPRH RGAAKKPMWI IVLLSLVCVA LMGAYVYPPR HYSACYFFAS SVCTPFKDWL PAVVRERTDE EIVSSVVIRN LLSMPMAVSK
101: NPKIAFMFLT PGSLPFEKLW EEFLQGHDGR YSIYIHASRE IPVHSSSLFV GREIRSEKVV WGRISMVDAE KRLLANALED VDNQFFVLLS DSCVPVHTFD
201: YIYNYLMGTN VSFIDCFLDP GPHGTGRYSM EMLPEIEQRD FRKGAQWFAI TRRHALLILA DNLYYNKFKL YCKPAEGRNC IADEHYLPTF FNMVDPGGIA
301: NWSVTHVDWS EGKWHPRSYR AADVTYELLK NITSVNENFR ITSDDKKVVT RIPCMWNGTK RPCYLFARKF YPESLNNLLK LFSSYTSA
101: NPKIAFMFLT PGSLPFEKLW EEFLQGHDGR YSIYIHASRE IPVHSSSLFV GREIRSEKVV WGRISMVDAE KRLLANALED VDNQFFVLLS DSCVPVHTFD
201: YIYNYLMGTN VSFIDCFLDP GPHGTGRYSM EMLPEIEQRD FRKGAQWFAI TRRHALLILA DNLYYNKFKL YCKPAEGRNC IADEHYLPTF FNMVDPGGIA
301: NWSVTHVDWS EGKWHPRSYR AADVTYELLK NITSVNENFR ITSDDKKVVT RIPCMWNGTK RPCYLFARKF YPESLNNLLK LFSSYTSA
001: MKAIKGWRLG KINYMQSLPG ARHRAPTRKP IWIIAVLSLI AMFVIGAYMF PHHSKAACYM FSSKGCKGLT DWLPPSLREY SDDEIAARVV ISEILSSPRV
101: IKKSSKIAFM FLTPGTLPFE KLWDLFFQGH EGKFSVYIHA SKDTPVHTSR YFLNREIRSD EVVWGRISMI DAERRLLTNA LRDPENQQFV LLSDSCVPLR
201: SFEYMYNYMM HSNVSYVDCF DDPGPHGTGR HMDHMLPEIP REDFRKGAQW FSMKRQHAVV TVADNLYYSK FRDYCGPGVE GNKNCIADEH YLPTFFYMLD
301: PTGIANWTVT YVDWSERKWH PRKYMPEDIT LELIKNISSI DAVSRVTSEK NGVVSWTHCM WNGIKRPCYL FGRKFHADTL DKLMELFPNY TSIV
101: IKKSSKIAFM FLTPGTLPFE KLWDLFFQGH EGKFSVYIHA SKDTPVHTSR YFLNREIRSD EVVWGRISMI DAERRLLTNA LRDPENQQFV LLSDSCVPLR
201: SFEYMYNYMM HSNVSYVDCF DDPGPHGTGR HMDHMLPEIP REDFRKGAQW FSMKRQHAVV TVADNLYYSK FRDYCGPGVE GNKNCIADEH YLPTFFYMLD
301: PTGIANWTVT YVDWSERKWH PRKYMPEDIT LELIKNISSI DAVSRVTSEK NGVVSWTHCM WNGIKRPCYL FGRKFHADTL DKLMELFPNY TSIV
Arabidopsis Description
At2g19160 [Source:UniProtKB/TrEMBL;Acc:Q8W460]
SUBAcon: [mitochondrion,golgi]
SUBAcon: [mitochondrion,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.