Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- golgi 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27341663
|
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG20537 | Sorghum | mitochondrion | 95.5 | 95.5 |
| Zm00001d046936_P002 | Maize | golgi | 92.06 | 87.66 |
| Os06t0661900-01 | Rice | golgi | 85.71 | 84.82 |
| TraesCS7A01G489600.1 | Wheat | golgi | 83.86 | 83.86 |
| TraesCS7B01G392700.1 | Wheat | golgi | 83.86 | 83.86 |
| HORVU7Hr1G109810.1 | Barley | golgi | 83.33 | 83.33 |
| TraesCS7D01G476000.1 | Wheat | golgi | 83.33 | 83.33 |
| Zm00001d015429_P004 | Maize | golgi | 81.48 | 81.7 |
| Zm00001d053763_P001 | Maize | golgi | 79.89 | 77.84 |
| GSMUA_Achr7P08690_001 | Banana | endoplasmic reticulum, golgi | 57.94 | 73.99 |
| GSMUA_Achr11P... | Banana | cytosol | 55.29 | 71.82 |
| GSMUA_Achr4P12520_001 | Banana | golgi | 69.84 | 67.52 |
| GSMUA_Achr4P05750_001 | Banana | golgi | 69.05 | 66.75 |
| Zm00001d024348_P002 | Maize | mitochondrion | 61.64 | 62.97 |
| Zm00001d014668_P001 | Maize | plasma membrane | 60.85 | 61.83 |
| Zm00001d026261_P001 | Maize | golgi, mitochondrion | 62.43 | 61.62 |
| Zm00001d002382_P002 | Maize | golgi, mitochondrion | 62.43 | 60.98 |
| Zm00001d036482_P001 | Maize | plasma membrane | 60.32 | 60.96 |
| Zm00001d033892_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 34.39 | 35.62 |
| Zm00001d041221_P001 | Maize | golgi, mitochondrion, plasma membrane, plastid | 36.77 | 35.1 |
| Zm00001d031187_P002 | Maize | plastid | 35.98 | 34.17 |
| Zm00001d033890_P001 | Maize | golgi | 36.51 | 32.78 |
| Zm00001d033891_P001 | Maize | cytosol, golgi, plasma membrane | 34.92 | 32.75 |
| Zm00001d039970_P001 | Maize | plastid | 31.75 | 32.52 |
| Zm00001d035039_P001 | Maize | plasma membrane | 33.86 | 30.92 |
| Zm00001d008568_P001 | Maize | golgi | 31.48 | 30.91 |
| Zm00001d026711_P001 | Maize | cytosol, golgi, plasma membrane | 35.19 | 30.43 |
| Zm00001d039969_P001 | Maize | plasma membrane | 32.01 | 30.02 |
| Zm00001d042652_P001 | Maize | golgi, peroxisome, vacuole | 33.6 | 29.53 |
| Zm00001d016103_P001 | Maize | golgi, plasma membrane, plastid | 33.33 | 28.25 |
| Zm00001d043768_P001 | Maize | golgi, mitochondrion, plastid | 29.1 | 28.13 |
| Zm00001d053393_P002 | Maize | golgi, plastid | 32.8 | 27.62 |
| Zm00001d009810_P003 | Maize | mitochondrion, vacuole | 30.42 | 21.66 |
Protein Annotations
| EnsemblPlants:Zm00001d036668_P004 | EnsemblPlants:Zm00001d036668_T004 | EnsemblPlantsGene:Zm00001d036668 | EntrezGene:103629675 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0008375 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 |
| InterPro:Glyco_trans_14 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF15 | PFAM:PF02485 | ProteinID:AQK81648.1 | ProteinID:AQK81653.1 |
| TMHMM:TMhelix | UniParc:UPI000220824E | UniProt:A0A1D6LQ88 | MapMan:35.1 | : | : |
Description
Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein
Coordinates
chr6:+:97142456..97149112
Molecular Weight (calculated)
43397.4 Da
IEP (calculated)
7.556
GRAVY (calculated)
-0.174
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVMMPQRHR ATAKKPMWII VLLSMVCIML IGAYVFPPRR FSKCYLSASS VCTSFKDWLP SMGHRERADE EIISSVVIRD ILSMPMPMSK NPKIALMFLT
101: PGSLPFEKLW ETFLQGHEGR YSIYVHASRE KPVHTSSLFA GRDIHSDAIV WGLISMVDAE KRLLANALED VDNQVFVLLS DSCVPLHSFD YVYNYLMGTN
201: VSFIDCFKDP GPHGSGRYPI EMYPEIDESD FRKGAQWFAV TRRHALMILA DSLYYKKFKL YCKPAEGRNC IADEHYLPTL FNMVDPGGIS NWSVTHVDWS
301: EGKWHPRSYS ADDVTYDLLK NITTTDENFH VTSDDKKLVM QKPCLWNGSK RPCYLFARKF NPEALDNLLK LFTSYTSV
101: PGSLPFEKLW ETFLQGHEGR YSIYVHASRE KPVHTSSLFA GRDIHSDAIV WGLISMVDAE KRLLANALED VDNQVFVLLS DSCVPLHSFD YVYNYLMGTN
201: VSFIDCFKDP GPHGSGRYPI EMYPEIDESD FRKGAQWFAV TRRHALMILA DSLYYKKFKL YCKPAEGRNC IADEHYLPTL FNMVDPGGIS NWSVTHVDWS
301: EGKWHPRSYS ADDVTYDLLK NITTTDENFH VTSDDKKLVM QKPCLWNGSK RPCYLFARKF NPEALDNLLK LFTSYTSV
001: MKAIKGWRLG KINYMQSLPG ARHRAPTRKP IWIIAVLSLI AMFVIGAYMF PHHSKAACYM FSSKGCKGLT DWLPPSLREY SDDEIAARVV ISEILSSPRV
101: IKKSSKIAFM FLTPGTLPFE KLWDLFFQGH EGKFSVYIHA SKDTPVHTSR YFLNREIRSD EVVWGRISMI DAERRLLTNA LRDPENQQFV LLSDSCVPLR
201: SFEYMYNYMM HSNVSYVDCF DDPGPHGTGR HMDHMLPEIP REDFRKGAQW FSMKRQHAVV TVADNLYYSK FRDYCGPGVE GNKNCIADEH YLPTFFYMLD
301: PTGIANWTVT YVDWSERKWH PRKYMPEDIT LELIKNISSI DAVSRVTSEK NGVVSWTHCM WNGIKRPCYL FGRKFHADTL DKLMELFPNY TSIV
101: IKKSSKIAFM FLTPGTLPFE KLWDLFFQGH EGKFSVYIHA SKDTPVHTSR YFLNREIRSD EVVWGRISMI DAERRLLTNA LRDPENQQFV LLSDSCVPLR
201: SFEYMYNYMM HSNVSYVDCF DDPGPHGTGR HMDHMLPEIP REDFRKGAQW FSMKRQHAVV TVADNLYYSK FRDYCGPGVE GNKNCIADEH YLPTFFYMLD
301: PTGIANWTVT YVDWSERKWH PRKYMPEDIT LELIKNISSI DAVSRVTSEK NGVVSWTHCM WNGIKRPCYL FGRKFHADTL DKLMELFPNY TSIV
Arabidopsis Description
At2g19160 [Source:UniProtKB/TrEMBL;Acc:Q8W460]
SUBAcon: [mitochondrion,golgi]
SUBAcon: [mitochondrion,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.