Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- golgi 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES04616 | Sorghum | golgi | 96.02 | 93.78 |
| Zm00001d053763_P001 | Maize | golgi | 94.96 | 92.27 |
| Os02t0175500-01 | Rice | golgi | 90.45 | 87.44 |
| TraesCS6D01G143800.1 | Wheat | golgi | 85.15 | 82.31 |
| HORVU6Hr1G030990.4 | Barley | golgi | 84.88 | 82.05 |
| TraesCS6A01G154200.1 | Wheat | golgi | 84.62 | 81.79 |
| TraesCS6B01G181900.1 | Wheat | golgi | 84.35 | 81.54 |
| Zm00001d036668_P004 | Maize | plasma membrane | 81.7 | 81.48 |
| GSMUA_Achr7P08690_001 | Banana | endoplasmic reticulum, golgi | 59.42 | 75.68 |
| Zm00001d046936_P002 | Maize | golgi | 78.25 | 74.31 |
| GSMUA_Achr11P... | Banana | cytosol | 55.7 | 72.16 |
| GSMUA_Achr4P05750_001 | Banana | golgi | 72.41 | 69.82 |
| GSMUA_Achr4P12520_001 | Banana | golgi | 72.15 | 69.57 |
| Zm00001d026261_P001 | Maize | golgi, mitochondrion | 65.78 | 64.75 |
| Zm00001d002382_P002 | Maize | golgi, mitochondrion | 66.31 | 64.6 |
| Zm00001d024348_P002 | Maize | mitochondrion | 62.6 | 63.78 |
| Zm00001d014668_P001 | Maize | plasma membrane | 62.33 | 63.17 |
| Zm00001d036482_P001 | Maize | plasma membrane | 62.6 | 63.1 |
| Zm00001d033892_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 33.95 | 35.07 |
| Zm00001d041221_P001 | Maize | golgi, mitochondrion, plasma membrane, plastid | 36.6 | 34.85 |
| Zm00001d031187_P002 | Maize | plastid | 36.34 | 34.42 |
| Zm00001d033891_P001 | Maize | cytosol, golgi, plasma membrane | 35.81 | 33.5 |
| Zm00001d039970_P001 | Maize | plastid | 32.63 | 33.33 |
| Zm00001d033890_P001 | Maize | golgi | 36.87 | 33.02 |
| Zm00001d008568_P001 | Maize | golgi | 32.36 | 31.69 |
| Zm00001d035039_P001 | Maize | plasma membrane | 34.75 | 31.64 |
| Zm00001d026711_P001 | Maize | cytosol, golgi, plasma membrane | 35.28 | 30.43 |
| Zm00001d039969_P001 | Maize | plasma membrane | 31.57 | 29.53 |
| Zm00001d042652_P001 | Maize | golgi, peroxisome, vacuole | 32.89 | 28.84 |
| Zm00001d016103_P001 | Maize | golgi, plasma membrane, plastid | 33.69 | 28.48 |
| Zm00001d053393_P002 | Maize | golgi, plastid | 33.16 | 27.84 |
| Zm00001d043768_P001 | Maize | golgi, mitochondrion, plastid | 27.85 | 26.85 |
| Zm00001d009810_P003 | Maize | mitochondrion, vacuole | 29.97 | 21.28 |
Protein Annotations
| EMBL:BT064185 | EnsemblPlants:Zm00001d015429_P004 | EnsemblPlants:Zm00001d015429_T004 | EnsemblPlantsGene:Zm00001d015429 | EntrezGene:100382404 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 | GO:GO:0016020 | GO:GO:0016740 | GO:GO:0016757 |
| InterPro:Glyco_trans_14 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF19 | PFAM:PF02485 | ProteinID:AQK68845.1 | ProteinID:AQK68847.1 |
| ProteinID:AQK68849.1 | TMHMM:TMhelix | UniParc:UPI0001948DA0 | UniProt:C0P7B6 | MapMan:35.1 | : |
Description
Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein
Coordinates
chr5:+:89664759..89673748
Molecular Weight (calculated)
43425.4 Da
IEP (calculated)
8.583
GRAVY (calculated)
-0.182
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAMPHPRHR GAAKKPMWII VLLSLVCVAL MGAYVYPPRR YSACYFFASS VCTPFKDWLP AVARERTDEE IVSSVVIRDL LSMPMAMSKN PKIAFMFLTP
101: GSLPFEKLWE KFLQGHDGRY SIYIHASREK PVHSSSLFVG REIHSEKVVW GRISMVDAEK RLLGNALEDV DNQFFVLLSD SCVPLHTFDY IYNYLMGTNV
201: SFIDCFFDPG PHGTGRYTME MLPEIEQRDF RKGAQWFAIT RRHALLILAD NLYYNKFKLY CKPAEGRNCI ADEHYLPTLF NMVDPGGIAN WSVTHVDWSE
301: GKWHPRSYRA ADVTYQLLKN ITSVNENVHI TSDDKKVVTQ TPCMWNGTKR PCYLFARKFY PESLNNLLKL FSSYTSA
101: GSLPFEKLWE KFLQGHDGRY SIYIHASREK PVHSSSLFVG REIHSEKVVW GRISMVDAEK RLLGNALEDV DNQFFVLLSD SCVPLHTFDY IYNYLMGTNV
201: SFIDCFFDPG PHGTGRYTME MLPEIEQRDF RKGAQWFAIT RRHALLILAD NLYYNKFKLY CKPAEGRNCI ADEHYLPTLF NMVDPGGIAN WSVTHVDWSE
301: GKWHPRSYRA ADVTYQLLKN ITSVNENVHI TSDDKKVVTQ TPCMWNGTKR PCYLFARKFY PESLNNLLKL FSSYTSA
001: MKAIKGWRLG KINYMQSLPG ARHRAPTRKP IWIIAVLSLI AMFVIGAYMF PHHSKAACYM FSSKGCKGLT DWLPPSLREY SDDEIAARVV ISEILSSPRV
101: IKKSSKIAFM FLTPGTLPFE KLWDLFFQGH EGKFSVYIHA SKDTPVHTSR YFLNREIRSD EVVWGRISMI DAERRLLTNA LRDPENQQFV LLSDSCVPLR
201: SFEYMYNYMM HSNVSYVDCF DDPGPHGTGR HMDHMLPEIP REDFRKGAQW FSMKRQHAVV TVADNLYYSK FRDYCGPGVE GNKNCIADEH YLPTFFYMLD
301: PTGIANWTVT YVDWSERKWH PRKYMPEDIT LELIKNISSI DAVSRVTSEK NGVVSWTHCM WNGIKRPCYL FGRKFHADTL DKLMELFPNY TSIV
101: IKKSSKIAFM FLTPGTLPFE KLWDLFFQGH EGKFSVYIHA SKDTPVHTSR YFLNREIRSD EVVWGRISMI DAERRLLTNA LRDPENQQFV LLSDSCVPLR
201: SFEYMYNYMM HSNVSYVDCF DDPGPHGTGR HMDHMLPEIP REDFRKGAQW FSMKRQHAVV TVADNLYYSK FRDYCGPGVE GNKNCIADEH YLPTFFYMLD
301: PTGIANWTVT YVDWSERKWH PRKYMPEDIT LELIKNISSI DAVSRVTSEK NGVVSWTHCM WNGIKRPCYL FGRKFHADTL DKLMELFPNY TSIV
Arabidopsis Description
At2g19160 [Source:UniProtKB/TrEMBL;Acc:Q8W460]
SUBAcon: [mitochondrion,golgi]
SUBAcon: [mitochondrion,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.