Factsheet for TraesCS6B01G181900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	golgi, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G154200.1	Wheat	golgi	98.21	98.21
TraesCS6D01G143800.1	Wheat	golgi	97.95	97.95
HORVU6Hr1G030990.4	Barley	golgi	96.67	96.67
Zm00001d015429_P004	Maize	golgi	81.54	84.35
Zm00001d053763_P001	Maize	golgi	82.05	82.47
EES04616	Sorghum	golgi	81.54	82.38
Os02t0175500-01	Rice	golgi	82.31	82.31
TraesCS7B01G392700.1	Wheat	golgi	72.31	74.6
GSMUA_Achr7P08690_001	Banana	endoplasmic reticulum, golgi	53.59	70.61
GSMUA_Achr11P...	Banana	cytosol	49.74	66.67
GSMUA_Achr4P05750_001	Banana	golgi	66.15	65.98
GSMUA_Achr4P12520_001	Banana	golgi	65.13	64.96
TraesCS7B01G320800.1	Wheat	golgi	57.18	60.27
TraesCS2B01G452200.4	Wheat	mitochondrion	56.92	58.42
TraesCS3B01G478200.1	Wheat	mitochondrion	33.85	37.39
TraesCS4B01G062000.1	Wheat	golgi, plasma membrane, plastid	37.44	37.24
TraesCS3B01G418600.1	Wheat	golgi	34.36	34.81
TraesCS5B01G008600.1	Wheat	endoplasmic reticulum, golgi, peroxisome	35.13	33.01
TraesCS2B01G616400.1	Wheat	golgi	34.36	32.06
TraesCS7B01G221700.1	Wheat	cytosol, golgi, peroxisome	33.08	31.85
TraesCS3B01G046900.1	Wheat	golgi	31.03	30.63
TraesCS1B01G026200.1	Wheat	golgi	30.26	29.95
TraesCS1B01G134300.1	Wheat	golgi	29.49	29.49
TraesCS3B01G047000.1	Wheat	plastid	30.51	29.38
TraesCS3B01G291600.1	Wheat	plastid	28.97	27.29
TraesCS1B01G413900.1	Wheat	golgi, mitochondrion	32.05	26.94

Protein Annotations

EnsemblPlants:TraesCS6B01G181900.1	EnsemblPlantsGene:TraesCS6B01G181900	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF19	PFAM:PF02485
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:203923939..203931073

Molecular Weight (calculated)

45175.8 Da

IEP (calculated)

9.483

GRAVY (calculated)

-0.142

Length

390 amino acids

Sequence
(BLAST)

001: MKVSWVWQRG SKDMTAMPHP RHRTAKKPMW IIVLLSIVCV SLIGAYVYPP RRYSTCYFFA SSVCTPFKDW LPAVTRRELT DQEVFSSVVI RDLLAMPMPV
101: SKKPKIAFMF LTPGSLPFEK LWERFLQGHE GRYSIYIHAS REKPVHSSPL FVGREIRSEK VVWGRVSMVD AEKRLLGNAL LDIDNQFFVL LSDSCIPLHT
201: FDYIYNYLMG TNVSFIDSFL DPGPHGSGRY SIEMFPEIEH RDFRKGAQWF AITRRHAILI MADNLYYGKF KLYCKPTVGR NCIADEHYLP TLFKIVDPGG
301: ISNYSVTHVD WSEGKWHPRS YRAADITYEL LRNITYFNEI VHIASDETRT VTSTPCILNG RKRPCFLFAR KFYPDAVNNL LKLFPSYTSA

Best Arabidopsis Sequence Match ( AT2G19160.2 )
(BLAST)

001: MKAIKGWRLG KINYMQSLPG ARHRAPTRKP IWIIAVLSLI AMFVIGAYMF PHHSKAACYM FSSKGCKGLT DWLPPSLREY SDDEIAARVV ISEILSSPRV
101: IKKSSKIAFM FLTPGTLPFE KLWDLFFQGH EGKFSVYIHA SKDTPVHTSR YFLNREIRSD EVVWGRISMI DAERRLLTNA LRDPENQQFV LLSDSCVPLR
201: SFEYMYNYMM HSNVSYVDCF DDPGPHGTGR HMDHMLPEIP REDFRKGAQW FSMKRQHAVV TVADNLYYSK FRDYCGPGVE GNKNCIADEH YLPTFFYMLD
301: PTGIANWTVT YVDWSERKWH PRKYMPEDIT LELIKNISSI DAVSRVTSEK NGVVSWTHCM WNGIKRPCYL FGRKFHADTL DKLMELFPNY TSIV

Arabidopsis Description

At2g19160 [Source:UniProtKB/TrEMBL;Acc:Q8W460]
SUBAcon: [golgi,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.