Factsheet for TraesCS3B01G047000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	golgi, plasma membrane, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	golgi
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G043200.1	Wheat	golgi, mitochondrion, plasma membrane, plastid	92.84	93.53
Os01t0133700-00	Rice	cytosol	33.09	60.63
TraesCS3B01G046900.1	Wheat	golgi	57.53	58.99
Os01t0133600-00	Rice	golgi, mitochondrion, plasma membrane, plastid	55.8	54.07
TraesCS1B01G026200.1	Wheat	golgi	42.72	43.91
TraesCS3B01G418600.1	Wheat	golgi	38.52	40.52
TraesCS3B01G478200.1	Wheat	mitochondrion	34.57	39.66
TraesCS2B01G616400.1	Wheat	golgi	40.25	39.0
TraesCS4B01G062000.1	Wheat	golgi, plasma membrane, plastid	36.54	37.76
TraesCS7B01G221700.1	Wheat	cytosol, golgi, peroxisome	37.53	37.53
TraesCS5B01G008600.1	Wheat	endoplasmic reticulum, golgi, peroxisome	37.04	36.14
TraesCS7B01G392700.1	Wheat	golgi	29.88	32.01
TraesCS1B01G413900.1	Wheat	golgi, mitochondrion	36.3	31.68
TraesCS7B01G320800.1	Wheat	golgi	27.9	30.54
TraesCS6B01G181900.1	Wheat	golgi	29.38	30.51
TraesCS2B01G452200.4	Wheat	mitochondrion	27.9	29.74
TraesCS1B01G134300.1	Wheat	golgi	24.94	25.9
TraesCS3B01G291600.1	Wheat	plastid	25.43	24.88

Protein Annotations

EnsemblPlants:TraesCS3B01G047000.1	EnsemblPlantsGene:TraesCS3B01G047000	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF26	PFAM:PF02485
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr3B:-:23943884..23945627

Molecular Weight (calculated)

44185.3 Da

IEP (calculated)

8.851

GRAVY (calculated)

0.004

Length

405 amino acids

Sequence
(BLAST)

001: MASSSSSTAK PMEAVRSGSV LSNVVTVLLL LSLGFVFGMV YNANFQESHL TPFLQPLPSL LRSSPTRSSP TPVVGCGVGP PSPSPTPPQA PPPARMGFAD
101: FLAPSGGGLA HNMTDEELFW RASMVPRVAL VPRRIVPKVA FLFLVTGDMP LRPLWEKFFA GHEGLYSIYV HASPAYTGSP PADSVFYGRM IPSQNTSWGN
201: MNLVDAERRL LGTALLDLGN ARFALLSETC IPLLSFPAAY AFLTSANASF IDSFPTRKRH APFFLRRNIS RAQWRKGSQW FEMDRELAVD VVAEEQYMAV
301: FRGDHGIANM LEHYMPTLVT LLGWGARAAN RTLTYTDWPR PGPHPASYGV RDVTPELLEG MRRGNGECGS GASGAVEFCF MFARKFSGDA LDKLLELAPK
401: VMGFG

Best Arabidopsis Sequence Match ( AT1G10280.1 )
(BLAST)

001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF

Arabidopsis Description

At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.