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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane, golgi, plastid

Predictor Summary:
  • plastid 1
  • mitochondrion 2
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, mitochondrion, plasma membrane, plastid
Any Predictor:golgi, mitochondrion, plasma membrane, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:mitochondrion
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G047000.1 Wheat plastid 93.53 92.84
TraesCS3D01G043100.1 Wheat plastid 82.34 78.62
TraesCS3D01G042800.2 Wheat golgi, plasma membrane, plastid 79.1 76.44
Os01t0133700-00 Rice cytosol 34.33 62.44
TraesCS3D01G042700.1 Wheat golgi 57.71 58.29
Os01t0133600-00 Rice golgi, mitochondrion, plasma membrane, plastid 55.97 53.83
TraesCS1D01G394500.1 Wheat mitochondrion 32.59 44.86
TraesCS1D01G022300.1 Wheat golgi, plasma membrane, vacuole 43.28 44.5
TraesCS3D01G379500.1 Wheat golgi 39.55 40.77
TraesCS2D01G566600.1 Wheat cytosol, golgi, plasma membrane 40.55 39.18
TraesCS4D01G061000.1 Wheat golgi, plasma membrane, plastid 38.06 39.03
TraesCS7D01G317600.1 Wheat cytosol, golgi, peroxisome 38.31 38.02
TraesCS5D01G015600.1 Wheat cytosol, golgi, mitochondrion 38.31 35.0
TraesCS7D01G476000.1 Wheat golgi 30.6 32.54
TraesCS2D01G428700.2 Wheat mitochondrion 29.6 31.32
TraesCS6D01G143800.1 Wheat golgi 30.35 31.28
TraesCS7D01G412700.1 Wheat golgi 28.11 30.54
TraesCS3D01G258800.1 Wheat golgi, mitochondrion, plastid 25.62 26.14
TraesCS1D01G115700.1 Wheat golgi 24.63 25.45
Protein Annotations
EnsemblPlants:TraesCS3D01G043200.1EnsemblPlantsGene:TraesCS3D01G043200GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0008375
GO:GO:0016020GO:GO:0016740InterPro:Glyco_trans_14PANTHER:PTHR31042PANTHER:PTHR31042:SF11PFAM:PF02485
SEG:segTMHMM:TMhelixMapMan:35.1:::
Description
No Description!
Coordinates
chr3D:-:16501503..16503245
Molecular Weight (calculated)
44137.4 Da
IEP (calculated)
9.097
GRAVY (calculated)
-0.006
Length
402 amino acids
Sequence
(BLAST)
001: MDNNSSRSSM AKPMEAVRSG SVLSNVVTVM LLLSLGFVFG MVYNANFQES HLTPFLQPLP SLLRPSPTPV VACGVGPPSP SPTSPQSPPP ARMGFADFLA
101: PSGGGLMHNM TDEELFWRAS MVPRVALVPR RIVPKVAFLF LVTGNLPLRP LWEKFFAGHE GLYSIYVHAS PAYTGSPPAD SVFYGRMIPS QNTSWGNMNL
201: VDAERRLLGT ALLDLGNARF ALLSETCIPL LSFPAAHAFL TGANASFIDS FPTRARHAPF FLQRNISRAQ WRKGSQWFEM DRELAVDVIA EERYMAVFRG
301: DHGIANMLEH YMPTLVTLLG WGTRAANRTL TYTDWPRPGP HPASYGVRDV TPELLEGMRR GNGECGYSAG KAVEFCFMFA RKFSGDALGK LLELAPKVMG
401: FG
Best Arabidopsis Sequence Match ( AT1G68380.1 )
(BLAST)
001: MPTQKDQNSP LSQVIELLKK LLHHFHNLLL YFFILWIGVI VGIIVYPSLQ GLSSPSSLTI QSVSQLFFVT PPPPILSPSF QDNGLDMFLI PLKNIMHDME
101: DNELLWRASM DPKIRDYPYP RIPKVAFMFL TWGPLPLAPL WERFFRGHEG LFTIYVHTNS SYDEFMPQDS VFYGRRIPSK RVDWGNANMV EAERRLLANA
201: LLDINNERFI LLSESCIPLF NFSTVYSFLI DSTLTHVDSY DLTIGRVRYD RRMYPHIRMH QWRKGSQWFE LDRAMALEVV SDTFYWPIFK AYSRCPDEHY
301: IPTLLNMRPS LGLRNANRTL TWTDWSKRRA HPRLFGEWEV NVEFLEWLRM KSVGDCKKNG ENKMRLCFLF ARKFSSTALD ELLRLASIVM YF
Arabidopsis Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9M9C3]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.