Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- golgi 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G026200.1 | Wheat | golgi | 96.16 | 95.43 |
| TraesCS1A01G022400.1 | Wheat | golgi, vacuole | 83.12 | 92.33 |
| TraesCS1D01G394500.1 | Wheat | mitochondrion | 36.83 | 49.32 |
| TraesCS3D01G043200.1 | Wheat | golgi, mitochondrion, plasma membrane, plastid | 44.5 | 43.28 |
| TraesCS3D01G042800.2 | Wheat | golgi, plasma membrane, plastid | 45.52 | 42.79 |
| TraesCS3D01G043100.1 | Wheat | plastid | 45.01 | 41.81 |
| TraesCS3D01G042700.1 | Wheat | golgi | 40.92 | 40.2 |
| TraesCS4D01G061000.1 | Wheat | golgi, plasma membrane, plastid | 39.39 | 39.29 |
| TraesCS3D01G379500.1 | Wheat | golgi | 38.62 | 38.72 |
| TraesCS7D01G317600.1 | Wheat | cytosol, golgi, peroxisome | 36.57 | 35.31 |
| TraesCS2D01G566600.1 | Wheat | cytosol, golgi, plasma membrane | 37.34 | 35.1 |
| TraesCS5D01G015600.1 | Wheat | cytosol, golgi, mitochondrion | 38.11 | 33.86 |
| TraesCS7D01G476000.1 | Wheat | golgi | 32.74 | 33.86 |
| TraesCS7D01G412700.1 | Wheat | golgi | 31.46 | 33.24 |
| TraesCS2D01G428700.2 | Wheat | mitochondrion | 30.69 | 31.58 |
| TraesCS6D01G143800.1 | Wheat | golgi | 29.92 | 30.0 |
| TraesCS3D01G258800.1 | Wheat | golgi, mitochondrion, plastid | 29.16 | 28.93 |
| TraesCS1D01G115700.1 | Wheat | golgi | 27.88 | 28.02 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G022300.1 | EnsemblPlantsGene:TraesCS1D01G022300 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 |
| GO:GO:0016020 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF7 | PFAM:PF02485 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr1D:+:9440832..9443313
Molecular Weight (calculated)
42980.8 Da
IEP (calculated)
9.307
GRAVY (calculated)
-0.064
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKPQPRSAM VKPWGILSRF LLFSVAFMLG MASTFLLQSL LPTTGTVIWL ASADLSAAPT SAPPGLALGP PPPQQLGDGD NKHSGSGGGD ESGGMVMLHN
101: MTDDQLLLRA SMALRISSLV LPAPKVAFMF LVRGELPLAP LWERFFHGHT ALFSVYVHPD PTYLSSPEKG SVFYGRRVPS KEARWGKSSI VEAERRLLAS
201: ALLDAMNQHF VLLSETCVPL YNFTTVYSYL TQSAGATSFV DLFDTQRSRG RYRPAMTPTV TLANWRKGSQ WFATDRGLAL EVIGDVTYFP VFQRHCNGPC
301: IMDEHYLPTF IAASKWHGNA NRTLTFTQWT RGPHPDSYND VSVDLLQGMR NHGNCSDGGG TTSLCYLFAR KFPSGALPEL LRLAPRVMRF G
101: MTDDQLLLRA SMALRISSLV LPAPKVAFMF LVRGELPLAP LWERFFHGHT ALFSVYVHPD PTYLSSPEKG SVFYGRRVPS KEARWGKSSI VEAERRLLAS
201: ALLDAMNQHF VLLSETCVPL YNFTTVYSYL TQSAGATSFV DLFDTQRSRG RYRPAMTPTV TLANWRKGSQ WFATDRGLAL EVIGDVTYFP VFQRHCNGPC
301: IMDEHYLPTF IAASKWHGNA NRTLTFTQWT RGPHPDSYND VSVDLLQGMR NHGNCSDGGG TTSLCYLFAR KFPSGALPEL LRLAPRVMRF G
001: MKKQKITTFV KELNLRMNSK KEPISLRYIH ILGTVVFFSS VSSLVILLAF YLNQRLQTSL FLVEDYHTLS SNPLTSPSLS PPPSPSPRSS GSNIADEELM
101: WRAAMAPRSP MKNETHPKVA FMFLTRWNLP LSPLWEMFFK GHEGFYSIYV HTSPEFTQEP PESSVFYKKR IPSKAVEWGK CSMMDAEKRL ISHALLEPSN
201: ARFVLLSETC IPLFNFTTIY TYLTRSTRSF LGSFDDPRPM GRGRYTPKML PHVSLSDWRK GNQWFEISRR VAAEIVSDRR YYAVFKDHCR PPCYIDEHYL
301: PTLVNKICPE MNSNRTVTWV DWSRGGSHPA RFVRKDIRVG FLDRIRFGSN CSYEGEVTNV CFLFGRKFHV STLEPLMKIA PYLFGI
101: WRAAMAPRSP MKNETHPKVA FMFLTRWNLP LSPLWEMFFK GHEGFYSIYV HTSPEFTQEP PESSVFYKKR IPSKAVEWGK CSMMDAEKRL ISHALLEPSN
201: ARFVLLSETC IPLFNFTTIY TYLTRSTRSF LGSFDDPRPM GRGRYTPKML PHVSLSDWRK GNQWFEISRR VAAEIVSDRR YYAVFKDHCR PPCYIDEHYL
301: PTLVNKICPE MNSNRTVTWV DWSRGGSHPA RFVRKDIRVG FLDRIRFGSN CSYEGEVTNV CFLFGRKFHV STLEPLMKIA PYLFGI
Arabidopsis Description
Core-2/I-branching beta-1,6-n-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q0WR07]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.