Factsheet for TraesCS3D01G379500.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

golgi 3
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	endoplasmic reticulum, golgi
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G418600.1	Wheat	golgi	95.64	96.88
TraesCS3A01G386500.1	Wheat	golgi	96.15	95.91
HORVU3Hr1G081930.2	Barley	golgi	94.62	94.37
Os01t0875800-01	Rice	golgi	71.03	72.14
EES03971	Sorghum	golgi	65.13	64.3
Zm00001d042652_P001	Maize	golgi, peroxisome, vacuole	66.15	60.0
TraesCS7D01G317600.1	Wheat	cytosol, golgi, peroxisome	56.41	54.32
TraesCS2D01G566600.1	Wheat	cytosol, golgi, plasma membrane	52.82	49.52
TraesCS1D01G394500.1	Wheat	mitochondrion	36.15	48.29
TraesCS4D01G061000.1	Wheat	golgi, plasma membrane, plastid	45.9	45.66
TraesCS3D01G043200.1	Wheat	golgi, mitochondrion, plasma membrane, plastid	40.77	39.55
TraesCS3D01G042800.2	Wheat	golgi, plasma membrane, plastid	42.05	39.42
TraesCS1D01G022300.1	Wheat	golgi, plasma membrane, vacuole	38.72	38.62
TraesCS5D01G015600.1	Wheat	cytosol, golgi, mitochondrion	43.08	38.18
TraesCS3D01G043100.1	Wheat	plastid	40.77	37.77
TraesCS7D01G412700.1	Wheat	golgi	35.64	37.57
TraesCS3D01G042700.1	Wheat	golgi	37.95	37.19
TraesCS7D01G476000.1	Wheat	golgi	35.9	37.04
TraesCS2D01G428700.2	Wheat	mitochondrion	34.36	35.26
TraesCS6D01G143800.1	Wheat	golgi	34.1	34.1
TraesCS1D01G115700.1	Wheat	golgi	30.77	30.85
TraesCS3D01G258800.1	Wheat	golgi, mitochondrion, plastid	30.0	29.7

Protein Annotations

EnsemblPlants:TraesCS3D01G379500.1	EnsemblPlantsGene:TraesCS3D01G379500	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF21	PFAM:PF02485
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr3D:-:496405607..496406893

Molecular Weight (calculated)

44455.3 Da

IEP (calculated)

9.638

GRAVY (calculated)

-0.237

Length

390 amino acids

Sequence
(BLAST)

001: MKGGVVDDLR VMFTRKESST CLARSVMFLV IFAVGVIAGL WTATGPRTQY TRTYNNIVFP STTTTVYAEA GAEAEAGFAE FVAPTRLMHD MTDDQLFWRA
101: SMVPVAAEYP FNRVPKVAFM FLTGRGELPL APLWERFFRG NEDRFSVYVH APPGMTVNVS TDSPFYGRQI PSQETAWGSI SLMDAEKRLL ANALLDFSNE
201: RFVLLSESCI PLHSFRAVYD YLIGSRHSFV EVYFQQTKQC QGRYSRRMAP AIRLPQWRKG SQWFELSRDL AIDVLADTKY YPLFRRHCRP SCYPDEHYLP
301: TTVNMLHGAR NANRTVTYVD WSKGGAHPAK YTAGNVTAAA IQGIRRRRWR NDRPCYYNQR PTSMCFLFAR KFAPDTLGPL LNMSSAVMGY

Best Arabidopsis Sequence Match ( AT1G10280.1 )
(BLAST)

001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF

Arabidopsis Description

At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.