Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- golgi 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G065000.4 | Barley | cytosol | 81.22 | 99.07 |
| TraesCS3A01G258700.1 | Wheat | golgi, mitochondrion, plastid | 97.97 | 98.22 |
| TraesCS3B01G291600.1 | Wheat | plastid | 98.73 | 93.96 |
| Os01t0695200-01 | Rice | plastid | 74.62 | 80.99 |
| Zm00001d043768_P001 | Maize | golgi, mitochondrion, plastid | 80.2 | 80.82 |
| KXG33181 | Sorghum | golgi, mitochondrion, plastid | 80.2 | 80.82 |
| Solyc02g036250.1.1 | Tomato | cytosol | 22.34 | 56.05 |
| GSMUA_Achr3P28930_001 | Banana | golgi | 53.3 | 54.83 |
| KRH11480 | Soybean | mitochondrion | 52.03 | 54.38 |
| VIT_10s0116g00980.t01 | Wine grape | golgi | 51.52 | 53.42 |
| GSMUA_Achr9P21910_001 | Banana | golgi | 52.28 | 53.37 |
| PGSC0003DMT400042390 | Potato | golgi | 50.51 | 53.07 |
| Solyc02g080970.2.1 | Tomato | plastid | 52.03 | 52.43 |
| CDY31228 | Canola | golgi | 48.98 | 52.16 |
| CDY21023 | Canola | golgi | 49.24 | 51.6 |
| Bra034487.1-P | Field mustard | mitochondrion | 48.48 | 51.21 |
| CDY24895 | Canola | mitochondrion | 48.48 | 51.21 |
| Bra016802.1-P | Field mustard | golgi | 48.73 | 51.06 |
| CDY08638 | Canola | mitochondrion | 48.73 | 50.66 |
| PGSC0003DMT400055283 | Potato | golgi | 47.21 | 50.0 |
| AT1G62305.1 | Thale cress | golgi | 47.46 | 49.47 |
| KRH36494 | Soybean | mitochondrion | 52.28 | 48.93 |
| AT1G11940.1 | Thale cress | golgi | 46.95 | 48.3 |
| CDY34605 | Canola | golgi | 45.69 | 47.62 |
| Bra031797.1-P | Field mustard | cytosol | 39.59 | 46.15 |
| TraesCS1D01G115700.1 | Wheat | golgi | 42.64 | 43.19 |
| TraesCS1D01G394500.1 | Wheat | mitochondrion | 26.9 | 36.3 |
| CDY66259 | Canola | cytosol | 39.59 | 36.28 |
| TraesCS7D01G412700.1 | Wheat | golgi | 30.71 | 32.7 |
| TraesCS2D01G428700.2 | Wheat | mitochondrion | 29.19 | 30.26 |
| TraesCS3D01G379500.1 | Wheat | golgi | 29.7 | 30.0 |
| TraesCS7D01G476000.1 | Wheat | golgi | 28.68 | 29.89 |
| TraesCS4D01G061000.1 | Wheat | golgi, plasma membrane, plastid | 29.7 | 29.85 |
| TraesCS2D01G566600.1 | Wheat | cytosol, golgi, plasma membrane | 30.96 | 29.33 |
| TraesCS1D01G022300.1 | Wheat | golgi, plasma membrane, vacuole | 28.93 | 29.16 |
| TraesCS7D01G317600.1 | Wheat | cytosol, golgi, peroxisome | 29.95 | 29.14 |
| TraesCS6D01G143800.1 | Wheat | golgi | 28.68 | 28.97 |
| TraesCS3D01G042800.2 | Wheat | golgi, plasma membrane, plastid | 28.43 | 26.92 |
| TraesCS3D01G042700.1 | Wheat | golgi | 26.4 | 26.13 |
| TraesCS5D01G015600.1 | Wheat | cytosol, golgi, mitochondrion | 28.93 | 25.91 |
| TraesCS3D01G043200.1 | Wheat | golgi, mitochondrion, plasma membrane, plastid | 26.14 | 25.62 |
| TraesCS3D01G043100.1 | Wheat | plastid | 26.4 | 24.7 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G258800.1 | EnsemblPlantsGene:TraesCS3D01G258800 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 |
| GO:GO:0016020 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF2 | PFAM:PF02485 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr3D:-:360695492..360699820
Molecular Weight (calculated)
44613.9 Da
IEP (calculated)
9.867
GRAVY (calculated)
-0.182
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVAKRPPAP WALALPAGRR ARARLFLRLA APLSFLLLVA AFLRTQPPAA PLDALPPSAG PGKVAFLFLA RAGLPLDFLW DAFFRNGEEG RFSVYVHSAP
101: GFVLDRTTTG SPYFYGRQLA RAVKVAWGEP TMVQAEKMLF AAALEDPANQ RFVLLSDSCV PLYNFSYTYT YLMGSPKSIV DSFTDKTEKR YNPNMSPVIR
201: KDKWRKGSQW VMLIRKHAEV VVGDKHVFQV FRKHCKMVVT NALLGQKLVN ARRLGFVFRR KQILKGAAQE EHDCIPDEHY VQTLFSIKGL EDELERRTLT
301: YTSWNQSTLD PKDKMTWHPT TFEYDAASPE QINAIKSIDH VNYEVEHRTE WCQSNGTSVP CFLFARKFSY GAAMHLLEDG AFGLLKSAQL LVNF
101: GFVLDRTTTG SPYFYGRQLA RAVKVAWGEP TMVQAEKMLF AAALEDPANQ RFVLLSDSCV PLYNFSYTYT YLMGSPKSIV DSFTDKTEKR YNPNMSPVIR
201: KDKWRKGSQW VMLIRKHAEV VVGDKHVFQV FRKHCKMVVT NALLGQKLVN ARRLGFVFRR KQILKGAAQE EHDCIPDEHY VQTLFSIKGL EDELERRTLT
301: YTSWNQSTLD PKDKMTWHPT TFEYDAASPE QINAIKSIDH VNYEVEHRTE WCQSNGTSVP CFLFARKFSY GAAMHLLEDG AFGLLKSAQL LVNF
001: MPRLPSSRRG VVWFRWKILI TISTALCILA LFCINRQSNS TATTTTLSSS LSVARSRIPL VKYSGDRPKL AFLFLARRDL PLDFLWDRFF KSADQRNFSI
101: YVHSIPGFVF DESSTRSHFF YNRQLKNSIE VVWGESSMIA AERLLLASAL EDPSNQRFVL LSDSCVPLYD FGYIYRYLVS SPKSFVDSFL DKDNRYTMKM
201: FPVIRKEKWR KGSQWISLIR SHAEVIVNDD TVFPVFQKFC KRSLPLDPRK NWLYLKKRRH NCIPDEHYVQ TLLTMRGLEN EMERRTVTYT TWNLSAKKAE
301: AKSWHPLTFT SDNCGPEEIE GIKKINHVYY ESEYRTEWCR ANSKPVPCFL FARKFTRGAA MRLLSEGLIE SSIDTTTF
101: YVHSIPGFVF DESSTRSHFF YNRQLKNSIE VVWGESSMIA AERLLLASAL EDPSNQRFVL LSDSCVPLYD FGYIYRYLVS SPKSFVDSFL DKDNRYTMKM
201: FPVIRKEKWR KGSQWISLIR SHAEVIVNDD TVFPVFQKFC KRSLPLDPRK NWLYLKKRRH NCIPDEHYVQ TLLTMRGLEN EMERRTVTYT TWNLSAKKAE
301: AKSWHPLTFT SDNCGPEEIE GIKKINHVYY ESEYRTEWCR ANSKPVPCFL FARKFTRGAA MRLLSEGLIE SSIDTTTF
Arabidopsis Description
At1g62305 [Source:UniProtKB/TrEMBL;Acc:Q6DST3]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.