Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g036250.1.1 | Tomato | cytosol | 36.56 | 86.62 |
| PGSC0003DMT400042390 | Potato | golgi | 67.74 | 67.2 |
| VIT_10s0116g00980.t01 | Wine grape | golgi | 61.83 | 60.53 |
| KRH11480 | Soybean | mitochondrion | 58.06 | 57.29 |
| CDY08638 | Canola | mitochondrion | 55.91 | 54.88 |
| CDY31228 | Canola | golgi | 54.57 | 54.86 |
| Bra034487.1-P | Field mustard | mitochondrion | 54.57 | 54.42 |
| CDY24895 | Canola | mitochondrion | 54.57 | 54.42 |
| Bra016802.1-P | Field mustard | golgi | 54.84 | 54.26 |
| CDY21023 | Canola | golgi | 54.84 | 54.26 |
| AT1G11940.1 | Thale cress | golgi | 55.65 | 54.05 |
| AT1G62305.1 | Thale cress | golgi | 54.57 | 53.7 |
| HORVU3Hr1G065000.4 | Barley | cytosol | 45.16 | 52.01 |
| KRH36494 | Soybean | mitochondrion | 58.6 | 51.78 |
| GSMUA_Achr3P28930_001 | Banana | golgi | 52.96 | 51.44 |
| GSMUA_Achr9P21910_001 | Banana | golgi | 53.23 | 51.3 |
| CDY34605 | Canola | golgi | 51.34 | 50.53 |
| Os01t0695200-01 | Rice | plastid | 47.04 | 48.21 |
| Bra031797.1-P | Field mustard | cytosol | 43.28 | 47.63 |
| TraesCS3A01G258700.1 | Wheat | golgi, mitochondrion, plastid | 50.27 | 47.58 |
| TraesCS3D01G258800.1 | Wheat | golgi, mitochondrion, plastid | 50.0 | 47.21 |
| KXG33181 | Sorghum | golgi, mitochondrion, plastid | 49.46 | 47.06 |
| Zm00001d043768_P001 | Maize | golgi, mitochondrion, plastid | 49.19 | 46.8 |
| TraesCS3B01G291600.1 | Wheat | plastid | 50.0 | 44.93 |
| PGSC0003DMT400037735 | Potato | cytosol | 22.31 | 40.29 |
| PGSC0003DMT400001379 | Potato | mitochondrion | 45.16 | 40.1 |
| PGSC0003DMT400035937 | Potato | mitochondrion | 30.65 | 38.78 |
| CDY66259 | Canola | cytosol | 43.28 | 37.44 |
| PGSC0003DMT400014396 | Potato | cytosol | 29.57 | 37.16 |
| PGSC0003DMT400012489 | Potato | golgi | 33.6 | 33.51 |
| PGSC0003DMT400006434 | Potato | golgi, nucleus, plasma membrane | 34.41 | 33.16 |
| PGSC0003DMT400063986 | Potato | golgi | 33.33 | 31.23 |
| PGSC0003DMT400037733 | Potato | golgi | 31.45 | 30.39 |
| PGSC0003DMT400013770 | Potato | golgi | 33.33 | 30.1 |
| PGSC0003DMT400073984 | Potato | golgi | 31.45 | 29.77 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400055283 | EnsemblPlantsGene:PGSC0003DMG400021465 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF2 |
| PFAM:PF02485 | PGSC:PGSC0003DMG400021465 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002956BF2 | UniProt:M1BXQ3 |
| MapMan:35.1 | : | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400021465]
Coordinates
chr2:-:17631444..17636545
Molecular Weight (calculated)
43041.5 Da
IEP (calculated)
8.613
GRAVY (calculated)
-0.290
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKKGLAPGG ISWSAWKLHV IVVSLTLTIV VCMLPFLSLH RFSPSHYSQI PSSRRSLHSN WDSITLHEGQ PNPKVAFLFL ARRHLPLDFV WKCFFQNSDT
101: ANYSIYIHSE PGFVFNESTT RTRFFHDRQL KNSIKVGWGE ASMIGAERLL LKEALKDSAN TRFVLLSESC IPLYNFSYIY TYLMASPRSF VDSFLDEKEL
201: RYNPNMAPYI PMSKWRKGSQ WITLIRKHAE VVADDDVVFP VFKMFCKKRY NCIPDEHYVQ TLLAMHDSDG ELERRTITYT EWNQSASNMD KNSWHPMTFS
301: YADAGPDKIK RIKDIDNVYY DTEYRTEWCH NNSTLVPCFL FARKFSQGAA MHLLSGGVIS QFDASALMDP TP
101: ANYSIYIHSE PGFVFNESTT RTRFFHDRQL KNSIKVGWGE ASMIGAERLL LKEALKDSAN TRFVLLSESC IPLYNFSYIY TYLMASPRSF VDSFLDEKEL
201: RYNPNMAPYI PMSKWRKGSQ WITLIRKHAE VVADDDVVFP VFKMFCKKRY NCIPDEHYVQ TLLAMHDSDG ELERRTITYT EWNQSASNMD KNSWHPMTFS
301: YADAGPDKIK RIKDIDNVYY DTEYRTEWCH NNSTLVPCFL FARKFSQGAA MHLLSGGVIS QFDASALMDP TP
001: MTKKSQPQIP PPLSRRGGVV WLGWKLVIAF SVALCLLALL RIQLQYNSFT TLSFPLSVAR SQTPLHKYSG DRPKLAFLFL ARRDLPLDFM WDRFFKGVDH
101: ANFSIYIHSV PGFVFNEETT RSQYFYNRQL NNSIKVVWGE SSMIEAERLL LASALEDHSN QRFVLLSDRC APLYDFGYIY KYLISSPRSF VDSFLHTKET
201: RYSVKMSPVI PEEKWRKGSQ WIALIRSHAE VIVNDGIVFP VFKEFCKRCP PLGTNEAWLF LKQKRRNCIP DEHYVQTLLT MQGLESEMER RTVTYTVWNV
301: SGTKYEAKSW HPVTFTLENS GPEEIKEIKK IDHVYYESES RTEWCKADSK PVPCFLFARK FTNEAAMRIV SEGLIGSSAN KTL
101: ANFSIYIHSV PGFVFNEETT RSQYFYNRQL NNSIKVVWGE SSMIEAERLL LASALEDHSN QRFVLLSDRC APLYDFGYIY KYLISSPRSF VDSFLHTKET
201: RYSVKMSPVI PEEKWRKGSQ WIALIRSHAE VIVNDGIVFP VFKEFCKRCP PLGTNEAWLF LKQKRRNCIP DEHYVQTLLT MQGLESEMER RTVTYTVWNV
301: SGTKYEAKSW HPVTFTLENS GPEEIKEIKK IDHVYYESES RTEWCKADSK PVPCFLFARK FTNEAAMRIV SEGLIGSSAN KTL
Arabidopsis Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYH0]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.