CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11480	Soybean	mitochondrion	86.46	96.55
VIT_10s0116g00980.t01	Wine grape	golgi	63.9	70.79
PGSC0003DMT400042390	Potato	golgi	58.67	65.87
Solyc02g036250.1.1	Tomato	cytosol	24.47	65.61
Solyc02g080970.2.1	Tomato	plastid	58.67	63.17
PGSC0003DMT400055283	Potato	golgi	51.78	58.6
Bra034487.1-P	Field mustard	mitochondrion	51.78	58.45
CDY24895	Canola	mitochondrion	51.78	58.45
CDY08638	Canola	mitochondrion	52.49	58.31
HORVU3Hr1G065000.4	Barley	cytosol	44.66	58.2
AT1G62305.1	Thale cress	golgi	51.78	57.67
CDY31228	Canola	golgi	50.12	57.03
CDY21023	Canola	golgi	50.36	56.38
AT1G11940.1	Thale cress	golgi	50.83	55.87
Bra016802.1-P	Field mustard	golgi	49.64	55.59
Os01t0695200-01	Rice	plastid	45.61	52.89
GSMUA_Achr9P21910_001	Banana	golgi	48.22	52.59
TraesCS3A01G258700.1	Wheat	golgi, mitochondrion, plastid	48.93	52.42
CDY34605	Canola	golgi	47.03	52.38
TraesCS3D01G258800.1	Wheat	golgi, mitochondrion, plastid	48.93	52.28
GSMUA_Achr3P28930_001	Banana	golgi	47.51	52.22
Zm00001d043768_P001	Maize	golgi, mitochondrion, plastid	46.79	50.38
KXG33181	Sorghum	golgi, mitochondrion, plastid	46.79	50.38
Bra031797.1-P	Field mustard	cytosol	40.14	50.0
TraesCS3B01G291600.1	Wheat	plastid	48.93	49.76
KRH56549	Soybean	golgi	42.76	49.45
KRG93228	Soybean	golgi	42.76	48.65
KRH48972	Soybean	cytosol	21.62	42.72
KRH13326	Soybean	cytosol	21.14	41.78
CDY66259	Canola	cytosol	40.14	39.3
KRH46947	Soybean	cytosol	27.55	38.54
KRH01729	Soybean	cytosol	27.32	38.21
KRH47176	Soybean	cytosol, golgi, plasma membrane	30.88	33.59
KRH44223	Soybean	cytosol, golgi, plasma membrane	29.93	32.56
KRH05512	Soybean	nucleus	29.22	32.28
KRH15500	Soybean	nucleus	28.98	32.11
KRH06031	Soybean	golgi, plasma membrane, plastid	29.45	31.47
KRH19073	Soybean	golgi	29.22	31.3
KRH26270	Soybean	golgi	28.27	31.07
KRH60391	Soybean	golgi, plastid	27.55	30.85
KRH41690	Soybean	golgi	27.08	30.65
KRH16109	Soybean	mitochondrion	28.5	30.46
KRH05009	Soybean	golgi, mitochondrion	28.03	29.95
KRH02808	Soybean	golgi	28.5	28.57
KRG90861	Soybean	golgi, plasma membrane	28.5	28.5
KRH35920	Soybean	golgi, plasma membrane	28.03	28.43
KRH48513	Soybean	golgi	30.17	28.41
KRH39163	Soybean	golgi	28.5	26.61
KRH38159	Soybean	golgi	26.84	25.86

Protein Annotations

EMBL:ACUP02005377	EnsemblPlants:KRH36494	EnsemblPlantsGene:GLYMA_09G006600	EntrezGene:100805897	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14
PANTHER:PTHR31042	PANTHER:PTHR31042:SF2	PFAM:PF02485	PFscan:PS51257	ProteinID:KRH36494	ProteinID:KRH36494.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0006ED70D3	UniProt:A0A0R0I1Y5	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr9:-:483013..488406

Molecular Weight (calculated)

48539.8 Da

IEP (calculated)

10.026

GRAVY (calculated)

-0.205

Length

421 amino acids

Sequence
(BLAST)

001: MASMARGAKR RHSIISRKML ILFSASLSCV VVLVICSLFR FHSPKPPISI SISRVVFDGP PKIAFLFLVR RNLPLDFLWD AFFQNVDVSR FSIYVHSAPG
101: FVLDESTTRS QFLYGRQISN SIQVLWGESS MIQAERLLLA AALEDPANQR FVLLSDSCVP LYNFSYVYNY LMVSPRSFVD SFLDAKEGRY NPKMSPKIPR
201: EKWRKGSQWI TVVRKHAEVV VDDDVIFSVF KKYCKRRPPI DTSKGKLNLK LQKQHNCIPD EHYVQTLLAM HDLEGELERR TLTYTLWNQS TTKMENKGWH
301: PITFGYSNAS PQRIKEIKGI NHVYYETEYR IEWCHTNSTS VPCFLFARKF SQGAAMRLLS QEVVNHFEVS ALHILQTANG ITTSFNRHTP HKDFDGIIIQ
401: HTPHKQILKT KIGQVSADRM L

Best Arabidopsis Sequence Match ( AT1G11940.1 )
(BLAST)

001: MTKKSQPQIP PPLSRRGGVV WLGWKLVIAF SVALCLLALL RIQLQYNSFT TLSFPLSVAR SQTPLHKYSG DRPKLAFLFL ARRDLPLDFM WDRFFKGVDH
101: ANFSIYIHSV PGFVFNEETT RSQYFYNRQL NNSIKVVWGE SSMIEAERLL LASALEDHSN QRFVLLSDRC APLYDFGYIY KYLISSPRSF VDSFLHTKET
201: RYSVKMSPVI PEEKWRKGSQ WIALIRSHAE VIVNDGIVFP VFKEFCKRCP PLGTNEAWLF LKQKRRNCIP DEHYVQTLLT MQGLESEMER RTVTYTVWNV
301: SGTKYEAKSW HPVTFTLENS GPEEIKEIKK IDHVYYESES RTEWCKADSK PVPCFLFARK FTNEAAMRIV SEGLIGSSAN KTL

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYH0]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.