Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- golgi 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH35920 | Soybean | golgi, plasma membrane | 63.16 | 66.51 |
| KRG90861 | Soybean | golgi, plasma membrane | 62.93 | 65.32 |
| GSMUA_Achr6P09800_001 | Banana | cytosol | 38.67 | 60.79 |
| TraesCS1D01G394500.1 | Wheat | mitochondrion | 37.76 | 56.51 |
| KRH60391 | Soybean | golgi, plastid | 48.51 | 56.38 |
| KRH41690 | Soybean | golgi | 47.37 | 55.65 |
| HORVU1Hr1G085260.1 | Barley | cytosol | 29.98 | 54.58 |
| CDX73016 | Canola | mitochondrion | 41.88 | 52.74 |
| Bra015963.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 41.88 | 52.29 |
| KRH01729 | Soybean | cytosol | 35.93 | 52.16 |
| KRH46947 | Soybean | cytosol | 35.93 | 52.16 |
| KRH39163 | Soybean | golgi | 50.8 | 49.22 |
| KRH48513 | Soybean | golgi | 50.34 | 49.22 |
| KRH48972 | Soybean | cytosol | 23.34 | 47.89 |
| AT1G73810.1 | Thale cress | golgi, nucleus, peroxisome | 45.08 | 47.13 |
| KRH13326 | Soybean | cytosol | 22.88 | 46.95 |
| KRH05512 | Soybean | nucleus | 40.5 | 46.46 |
| KRH15500 | Soybean | nucleus | 40.05 | 46.05 |
| KRH47176 | Soybean | cytosol, golgi, plasma membrane | 39.82 | 44.96 |
| KRH44223 | Soybean | cytosol, golgi, plasma membrane | 39.82 | 44.96 |
| KRH26270 | Soybean | golgi | 39.36 | 44.91 |
| KRH06031 | Soybean | golgi, plasma membrane, plastid | 40.05 | 44.42 |
| Os02t0327500-01 | Rice | golgi | 43.02 | 42.82 |
| Zm00001d016103_P001 | Maize | golgi, plasma membrane, plastid | 41.19 | 40.36 |
| Zm00001d053393_P002 | Maize | golgi, plastid | 41.19 | 40.09 |
| TraesCS1B01G413900.1 | Wheat | golgi, mitochondrion | 41.88 | 39.44 |
| TraesCS1A01G386500.1 | Wheat | golgi, mitochondrion | 41.65 | 38.97 |
| OQU84731 | Sorghum | plastid | 42.33 | 38.54 |
| KRH19073 | Soybean | golgi | 31.35 | 34.86 |
| KRH05009 | Soybean | golgi, mitochondrion | 31.12 | 34.52 |
| KRH16109 | Soybean | mitochondrion | 30.89 | 34.26 |
| HORVU1Hr1G085240.4 | Barley | golgi, mitochondrion, plastid | 36.16 | 33.62 |
| KRH02808 | Soybean | golgi | 31.12 | 32.38 |
| KRH56549 | Soybean | golgi | 26.09 | 31.32 |
| KRG93228 | Soybean | golgi | 25.4 | 30.0 |
| KRH11480 | Soybean | mitochondrion | 24.94 | 28.91 |
| KRH36494 | Soybean | mitochondrion | 25.86 | 26.84 |
| CDX73017 | Canola | cytosol | 0.69 | 21.43 |
Protein Annotations
| EMBL:ACUP02005675 | EnsemblPlants:KRH38159 | EnsemblPlantsGene:GLYMA_09G115200 | EntrezGene:100811590 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0008375 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | InterPro:Glyco_trans_14 |
| PANTHER:PTHR31042 | PANTHER:PTHR31042:SF17 | PFAM:PF02485 | ProteinID:KRH38159 | ProteinID:KRH38159.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI000233C320 | UniProt:I1L2P3 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr9:+:25013396..25021234
Molecular Weight (calculated)
50784.8 Da
IEP (calculated)
8.437
GRAVY (calculated)
-0.340
Length
437 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSSNNQHPL NSVSKHFNLQ LVRFLPYLLF LAFGVTIGII ISFYLKSFSL QHTQFLHSSS SQINAPPPNT MPPPIEKPEV SDSNLNQEGP EEFTPPSNVV
101: HNTQESIQPS IVVHDTKKFI QPSNHVVHNM KEFIHPSNVV HDMSDEELLW RASMTPKIRE YPFDRVAKVA FMFLVRGPVP LAIFWERFFK GHEGYYSIYV
201: HSNPSYNGSD PESSVFHGRR IPSKIVEWGK FNMIEAERRL LANALLDFSN QRFILISESC IPLFNFSTIY SYLMNSTQSY VMAYDEDSLV GRGRYNPRMS
301: PMVTLKQWRK GSQWFEMDRE LALEVVSDKT YFPIFQEHCT RPCYADEHYL PTFVNIMFPE KNSNRSLTWV DWSKGGLHPT KYVRPEVTVA FLENLRNQKC
401: EYNGQAYTNA CFLFARKFLP TSLTRLMRFS PSVMHIQ
101: HNTQESIQPS IVVHDTKKFI QPSNHVVHNM KEFIHPSNVV HDMSDEELLW RASMTPKIRE YPFDRVAKVA FMFLVRGPVP LAIFWERFFK GHEGYYSIYV
201: HSNPSYNGSD PESSVFHGRR IPSKIVEWGK FNMIEAERRL LANALLDFSN QRFILISESC IPLFNFSTIY SYLMNSTQSY VMAYDEDSLV GRGRYNPRMS
301: PMVTLKQWRK GSQWFEMDRE LALEVVSDKT YFPIFQEHCT RPCYADEHYL PTFVNIMFPE KNSNRSLTWV DWSKGGLHPT KYVRPEVTVA FLENLRNQKC
401: EYNGQAYTNA CFLFARKFLP TSLTRLMRFS PSVMHIQ
001: MKKSQETQED SLQQESRHQL HQIVISKILR SHRFFQNLVL YSFLIGFGFG LGFILNVHIR NVSFNPQLFR LSSLSPSSFS TPPLQPQPEI VVPLNDTVVA
101: TNDDDHEVGQ KGHYLMMPEN VVHNMTEEEL LLRASKIQEK TLKMTKKAAF MFLTRGKLPL AKLWERFFKG HEGLFSIYIH TSDPFYFDDH TPETSPFYRR
201: RIPSKEVGWG MVSMVAAERR LLANALLDAG NHRFVLLSES DIPLFNFSTI YSYLINSQHS YVDVYDLPGP AGRGRYNRRM SPVISRTNWR KGSQWFEIDR
301: EVALAVVSDT TYFPVFEKYC LWNCYADEHY LSTFVHAMFP GKNANRSLTW TDWSRRGPHP RKYTRRSVTG EFLRRVRNRE QGCVYNGKKS EKCYLFARKF
401: DGSTLDKLLY FAHSVMGF
101: TNDDDHEVGQ KGHYLMMPEN VVHNMTEEEL LLRASKIQEK TLKMTKKAAF MFLTRGKLPL AKLWERFFKG HEGLFSIYIH TSDPFYFDDH TPETSPFYRR
201: RIPSKEVGWG MVSMVAAERR LLANALLDAG NHRFVLLSES DIPLFNFSTI YSYLINSQHS YVDVYDLPGP AGRGRYNRRM SPVISRTNWR KGSQWFEIDR
301: EVALAVVSDT TYFPVFEKYC LWNCYADEHY LSTFVHAMFP GKNANRSLTW TDWSRRGPHP RKYTRRSVTG EFLRRVRNRE QGCVYNGKKS EKCYLFARKF
401: DGSTLDKLLY FAHSVMGF
Arabidopsis Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9C9T1]
SUBAcon: [peroxisome,golgi,nucleus]
SUBAcon: [peroxisome,golgi,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.