CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:

nucleus 2
golgi 1
plastid 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26270	Soybean	golgi	83.76	86.16
GSMUA_Achr7P23520_001	Banana	cytosol	53.3	71.19
VIT_12s0035g01710.t01	Wine grape	golgi	64.47	67.02
CDY31036	Canola	golgi	61.68	64.46
CDX94911	Canola	golgi	62.94	64.42
CDX93443	Canola	golgi	62.69	64.32
GSMUA_Achr8P29190_001	Banana	cytosol	44.42	64.1
CDY20644	Canola	golgi	62.18	62.82
Bra018450.1-P	Field mustard	golgi	62.44	60.89
Bra019951.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	63.71	60.63
PGSC0003DMT400063986	Potato	golgi	60.91	60.45
Solyc01g103150.2.1	Tomato	golgi	60.66	60.2
AT1G10280.1	Thale cress	golgi	62.69	59.95
GSMUA_Achr8P08460_001	Banana	golgi	54.06	58.68
GSMUA_Achr5P01370_001	Banana	golgi	54.31	58.47
TraesCS7B01G221700.1	Wheat	cytosol, golgi, peroxisome	57.36	55.8
TraesCS7D01G317600.1	Wheat	cytosol, golgi, peroxisome	57.11	55.56
TraesCS7A01G320800.1	Wheat	cytosol, golgi, peroxisome	57.11	55.56
HORVU7Hr1G076790.5	Barley	golgi	56.85	54.77
GSMUA_Achr8P32350_001	Banana	golgi, mitochondrion	54.57	54.02
Os08t0110400-01	Rice	cytosol, golgi, peroxisome	55.33	53.56
EES14395	Sorghum	endoplasmic reticulum, golgi, plastid	55.84	53.4
Zm00001d035039_P001	Maize	plasma membrane	55.33	52.66
KRH01729	Soybean	cytosol	39.59	51.83
KRH46947	Soybean	cytosol	39.34	51.49
KRH13326	Soybean	cytosol	26.9	49.77
KRH48972	Soybean	cytosol	26.9	49.77
TraesCS2B01G616400.1	Wheat	golgi	52.03	49.04
TraesCS2D01G566600.1	Wheat	cytosol, golgi, plasma membrane	51.78	49.04
Os04t0272400-01	Rice	golgi, nucleus, peroxisome	51.27	49.03
HORVU2Hr1G127680.1	Barley	cytosol, golgi, plasma membrane	50.76	47.96
TraesCSU01G137600.1	Wheat	cytosol, golgi, plasma membrane	51.78	47.78
KRH05512	Soybean	nucleus	46.19	47.77
KRH60391	Soybean	golgi, plastid	44.67	46.81
KRH15500	Soybean	nucleus	44.92	46.58
KRH47176	Soybean	cytosol, golgi, plasma membrane	45.18	45.99
KRH41690	Soybean	golgi	43.4	45.97
KRH44223	Soybean	cytosol, golgi, plasma membrane	44.42	45.22
Zm00001d026711_P001	Maize	cytosol, golgi, plasma membrane	50.0	45.08
EES11719	Sorghum	golgi, mitochondrion, peroxisome	50.51	44.62
KRH35920	Soybean	golgi, plasma membrane	43.65	41.45
KRH48513	Soybean	golgi	46.45	40.94
KRG90861	Soybean	golgi, plasma membrane	43.65	40.86
KRH39163	Soybean	golgi	46.7	40.8
KRH38159	Soybean	golgi	44.42	40.05
KRH19073	Soybean	golgi	33.76	33.84
KRH16109	Soybean	mitochondrion	33.76	33.76
KRH05009	Soybean	golgi, mitochondrion	33.25	33.25
KRH11480	Soybean	mitochondrion	31.73	33.16
KRH56549	Soybean	golgi	30.2	32.69
KRG93228	Soybean	golgi	30.2	32.16
KRH02808	Soybean	golgi	33.76	31.67
KRH36494	Soybean	mitochondrion	31.47	29.45

Protein Annotations

EMBL:ACUP02009815	EnsemblPlants:KRH06031	EnsemblPlantsGene:GLYMA_16G000700	EntrezGene:100796634	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14
PANTHER:PTHR31042	PANTHER:PTHR31042:SF3	PFAM:PF02485	ProteinID:KRH06031	ProteinID:KRH06031.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI000233B4CD	UniProt:I1MJS9	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr16:+:59958..62208

Molecular Weight (calculated)

45351.4 Da

IEP (calculated)

8.703

GRAVY (calculated)

-0.211

Length

394 amino acids

Sequence
(BLAST)

001: MGRNQREREK EEGEKHVGLL RLAQILTFLV VFAGGVVIGL TTSSHINGHF ISQPYQYISL RNVPSPPPPE PTAMAAADPP LPPNLDLEAF LHPLNLTHCL
101: SDEELFWRAS LIPKKESYPF SRIPKVAFMF LTRGPLPMLP LWERFFHGHS SLFNIYIHSP PRFLLNVSHS SPFYLRHIPS QDVSWGTVTL ADAERRLLAN
201: ALLDFSNERF VLLSESCIPV YNFPTVYRYL TNSSLSFVES YDEPTRYGRG RYSRNMLPHI QLRHWRKGSQ WFELNRALAV YIVSDTNYYS LFRKYCKPAC
301: YPDEHYIPTF LNMFHGSLNS NRTVTWVDWS MLGPHPATYG RANITAGFIQ SIRNNGSLCR YNSEITSICY LFARKFDPSA LEPLLNLSSE VMNF

Best Arabidopsis Sequence Match ( AT1G10280.1 )
(BLAST)

001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF

Arabidopsis Description

At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.