Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G320800.1 | Wheat | cytosol, golgi, peroxisome | 84.28 | 84.69 |
| TraesCS7D01G317600.1 | Wheat | cytosol, golgi, peroxisome | 84.28 | 84.69 |
| TraesCS7B01G221700.1 | Wheat | cytosol, golgi, peroxisome | 83.78 | 84.2 |
| HORVU7Hr1G076790.5 | Barley | golgi | 82.8 | 82.4 |
| Zm00001d035039_P001 | Maize | plasma membrane | 82.56 | 81.16 |
| EES14395 | Sorghum | endoplasmic reticulum, golgi, plastid | 81.57 | 80.58 |
| Os04t0272400-01 | Rice | golgi, nucleus, peroxisome | 65.36 | 64.56 |
| GSMUA_Achr8P32350_001 | Banana | golgi, mitochondrion | 60.44 | 61.81 |
| VIT_12s0035g01710.t01 | Wine grape | golgi | 55.28 | 59.37 |
| CDX93443 | Canola | golgi | 55.77 | 59.11 |
| CDY31036 | Canola | golgi | 54.55 | 58.89 |
| CDX94911 | Canola | golgi | 55.53 | 58.7 |
| CDY20644 | Canola | golgi | 54.79 | 57.18 |
| PGSC0003DMT400063986 | Potato | golgi | 55.77 | 57.18 |
| KRH26270 | Soybean | golgi | 53.56 | 56.92 |
| Solyc01g103150.2.1 | Tomato | golgi | 54.79 | 56.17 |
| Bra019951.1-P | Field mustard | endoplasmic reticulum, golgi, plastid | 56.76 | 55.8 |
| Bra018450.1-P | Field mustard | golgi | 55.28 | 55.69 |
| KRH06031 | Soybean | golgi, plasma membrane, plastid | 53.56 | 55.33 |
| AT1G10280.1 | Thale cress | golgi | 55.28 | 54.61 |
| Os01t0875800-01 | Rice | golgi | 51.11 | 54.17 |
| Os01t0133700-00 | Rice | cytosol | 26.29 | 48.42 |
| Os03t0731050-00 | Rice | plastid | 44.47 | 42.29 |
| Os12t0635500-01 | Rice | golgi, plasma membrane, plastid | 40.54 | 40.54 |
| Os01t0133600-00 | Rice | golgi, mitochondrion, plasma membrane, plastid | 39.31 | 38.28 |
| Os10t0165000-01 | Rice | golgi | 36.61 | 36.88 |
| Os06t0700500-01 | Rice | golgi | 33.17 | 36.29 |
| Os02t0327500-01 | Rice | golgi | 38.33 | 35.54 |
| Os06t0661900-01 | Rice | golgi | 30.96 | 32.98 |
| Os02t0175500-01 | Rice | golgi | 31.2 | 32.56 |
| Os08t0225400-01 | Rice | cytosol, golgi | 32.43 | 31.96 |
| Os01t0695200-01 | Rice | plastid | 28.26 | 31.68 |
| Os05t0170000-02 | Rice | golgi | 28.75 | 29.32 |
Protein Annotations
| MapMan:35.1 | EntrezGene:4344479 | EMBL:AK100025 | ProteinID:BAD09537.1 | ProteinID:BAF22733.1 | ProteinID:BAT03498.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016740 | InterPro:Glyco_trans_14 | EnsemblPlantsGene:Os08g0110400 | EnsemblPlants:Os08t0110400-01 | PFAM:PF02485 | PANTHER:PTHR31042 |
| PANTHER:PTHR31042:SF3 | UniProt:Q6ZC58 | TMHMM:TMhelix | UniParc:UPI000023AE5D | RefSeq:XP_015651123.1 | SEG:seg |
Description
Protein of unknown function DUF266, plant family protein. (Os08t0110400-01)
Coordinates
chr8:-:546844..549396
Molecular Weight (calculated)
45992.7 Da
IEP (calculated)
8.453
GRAVY (calculated)
-0.187
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MWGDGKAMLK SRGGGAAGGA GGASGDEEAD YCPPTPRKEW WTTGLLVRLV TVAVIFMAGV VIGLSASANV SRYYYNSHTE LFFPSNTFGA CERADCAPTF
101: KSFVHPPHLA HSMSDPELFW RASLVPVADD FPFQRVPKVA FLFMTRGPLP FAPLWDRFFR GHHGLYSVYV HTLPDYKLNV SKNSAFFARQ IPSEEVSWGS
201: ITLVDAEKRL LANALLDFSN ERFVLLSESC IPVFNFPTVY EYLINSAHSF VESYNIDTPQ CAGRYNRRMA PHILPSQWRK GSEWFELNRE LALRIIADNK
301: YYSIFRKHCR PSCYPDEHYI PTYLHLFHGS LNANRTITWV DWSRGGPHPA RYGASNISEE FIQAIRNNGT RCTYNSKPTS VCYLFARKFA PSALGPLMNL
401: TSTILDF
101: KSFVHPPHLA HSMSDPELFW RASLVPVADD FPFQRVPKVA FLFMTRGPLP FAPLWDRFFR GHHGLYSVYV HTLPDYKLNV SKNSAFFARQ IPSEEVSWGS
201: ITLVDAEKRL LANALLDFSN ERFVLLSESC IPVFNFPTVY EYLINSAHSF VESYNIDTPQ CAGRYNRRMA PHILPSQWRK GSEWFELNRE LALRIIADNK
301: YYSIFRKHCR PSCYPDEHYI PTYLHLFHGS LNANRTITWV DWSRGGPHPA RYGASNISEE FIQAIRNNGT RCTYNSKPTS VCYLFARKFA PSALGPLMNL
401: TSTILDF
001: MARGGKEEGE KHIGLLKLAQ TLSFLLIFMA GIIIGLAASS HIDRYFNSLP RMFSSTTNLQ SIPFSTPDYS NCTIIHRDCT GNDDNESDDG GVKAEKPKVR
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF
101: DCWSIDGFVR PENLSHGMTD DELFWRASMV PVKEEYPYDR VPKVAFMFLT RGPLPMLPLW EKFFKGNEKY LSVYVHTPPG YDMNVSRDSP FYDRQIPSQR
201: VEWGSPLLTD AEKRLLANAL LDFSNERFVL LSESCVPVYN FSTVYTYLIN SAYSFVDSYD EPTRYGRGRY SRKMLPDIKL HHWRKGSQWF EVNRKIAIYI
301: ISDSKYYSLF KQFCRPACYP DEHYIPTFLN MFHGSMNANR SVTWVDWSIG GPHPATYAAA NITEGFLQSI RKNETDCLYN EEPTSLCFLF ARKFSPSALA
401: PLMNLSSTVL GF
Arabidopsis Description
At1g10280 [Source:UniProtKB/TrEMBL;Acc:Q9SY70]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.