Factsheet for Os12t0635500-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:

nucleus 1
plastid 3
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031187_P002	Maize	plastid	68.55	70.1
Zm00001d041221_P001	Maize	golgi, mitochondrion, plasma membrane, plastid	66.58	68.43
TraesCS3B01G478200.1	Wheat	mitochondrion	58.97	67.99
KXG24124	Sorghum	cytosol, golgi, plasma membrane, plastid	67.57	67.57
HORVU5Hr1G077980.1	Barley	cytosol, plastid	29.98	66.67
TraesCS5A01G010800.1	Wheat	endoplasmic reticulum, golgi, peroxisome, plastid	67.57	65.48
TraesCS5B01G008600.1	Wheat	endoplasmic reticulum, golgi, peroxisome	66.34	65.06
HORVU5Hr1G001380.1	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	64.37	63.9
HORVU5Hr1G001360.2	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	58.97	63.49
HORVU5Hr1G078030.1	Barley	cytosol, golgi, peroxisome, plastid	64.13	62.44
TraesCS5D01G015600.1	Wheat	cytosol, golgi, mitochondrion	67.08	62.05
GSMUA_Achr1P04590_001	Banana	cytosol	40.54	54.46
GSMUA_Achr1P04580_001	Banana	cytosol	39.07	53.72
Os03t0731050-00	Rice	plastid	53.32	50.7
Os01t0133700-00	Rice	cytosol	27.52	50.68
Os01t0875800-01	Rice	golgi	43.0	45.57
Os04t0272400-01	Rice	golgi, nucleus, peroxisome	43.98	43.45
Os01t0133600-00	Rice	golgi, mitochondrion, plasma membrane, plastid	43.73	42.58
Os08t0110400-01	Rice	cytosol, golgi, peroxisome	40.54	40.54
Os06t0700500-01	Rice	golgi	35.14	38.44
Os10t0165000-01	Rice	golgi	38.08	38.37
Os06t0661900-01	Rice	golgi	34.4	36.65
Os02t0327500-01	Rice	golgi	38.82	35.99
Os08t0225400-01	Rice	cytosol, golgi	35.63	35.11
Os02t0175500-01	Rice	golgi	33.42	34.87
Os05t0170000-02	Rice	golgi	31.7	32.33
Os01t0695200-01	Rice	plastid	28.26	31.68

Protein Annotations

EnsemblPlants:Os12t0635500-01	EnsemblPlantsGene:Os12g0635500	EntrezGene:4352886	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042
PANTHER:PTHR31042:SF28	PFAM:PF02485	ProteinID:ABA99964.1	ProteinID:BAT18246.1	RefSeq:XP_015620699.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI0000680B73	UniProt:Q2QLN3	MapMan:35.1	:	:

Description

Protein of unknown function DUF266, plant domain containing protein. (Os12t0635500-01)

Coordinates

chr12:+:27243709..27246146

Molecular Weight (calculated)

44793.6 Da

IEP (calculated)

9.536

GRAVY (calculated)

-0.133

Length

407 amino acids

Sequence
(BLAST)

001: MQGGVAMVVT VNGGNGKDSF GNMARPPSRS LLPLKLLKPF LIFAVLATGF LAAAAAALLL LGGGAGASYV PNVLSATAWQ QQPRCAQQQE DGGRAALERW
101: TRLPAASAWH NMSDEELLWA ASMEPRVRRY PYRRVPKVAF MFLTRGPLPL APLWERFFNG SGGRELFSIY VHSTPGYNPD FPTTSVFYRR QVPSQVAQWG
201: QTNMFDAERR LLANALLDGG NERFVLVSES CVPLHGFPAV YGYLTASRHS FVGAFDDPGP HGRGRYRAGL APEVSPEQWR KGAQWFEVDR SLAVFVVGDE
301: RYYPRFRELC RPPCYVDEHY LPTVLSIEAA GRIANRSVTW VDWSRGGAHP ATFGGADVGE AWVRKAAAGQ RCLYNGQPSE VCFLFARKLA PSALQPLLAL
401: PPTLLGY

Best Arabidopsis Sequence Match ( AT3G21310.3 )
(BLAST)

001: MGMEEGIKDN AASAPNSRPT NQLKALLPMR VLQVFLLFFV LVLGISVISM HMIKYLKIQT LAPSTLISTY DERITLESLI KPPLNGWHSM NDSELLWRAS
101: MEPRILDYPF KRVPKMAFMF LTKGPLPFAP LWERFFKGHE GFYSIYVHTL PNYRSDFPSS SVFYRRQIPS QHVAWGEMSM CDAERRLLAN ALLDISNEWF
201: VLLSEACIPL RGFNFVYRYV SRSRYSFMGS VDEDGPYGRG RYSYAMGPEV SLNEWRKGSQ WFEINRALAV DIVEDMVYYN KFKEFCRPPC YVDEHYFPTM
301: LSIGYPDFLA NRTLTWTDWS RGGAHPATFG KADITEKFIK KLSRGKACFY NDQPSQVCYL FARKFAPSAL KPLLKLAPKV LGF

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:TAIR;Acc:AT3G21310]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.