Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 5
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G097200.3 | Barley | golgi | 88.44 | 88.92 |
| TraesCS7D01G412700.1 | Wheat | golgi | 88.17 | 88.65 |
| KXG20769 | Sorghum | golgi | 88.44 | 88.44 |
| TraesCS7B01G320800.1 | Wheat | golgi | 87.9 | 88.38 |
| TraesCS7A01G419900.1 | Wheat | golgi | 87.9 | 88.38 |
| Zm00001d036482_P001 | Maize | plasma membrane | 87.9 | 87.43 |
| Zm00001d014668_P001 | Maize | plasma membrane | 85.75 | 85.75 |
| GSMUA_Achr7P08690_001 | Banana | endoplasmic reticulum, golgi | 57.26 | 71.96 |
| GSMUA_Achr11P... | Banana | cytosol | 54.03 | 69.07 |
| GSMUA_Achr4P12520_001 | Banana | golgi | 70.97 | 67.52 |
| GSMUA_Achr4P05750_001 | Banana | golgi | 68.55 | 65.22 |
| Os06t0661900-01 | Rice | golgi | 64.78 | 63.09 |
| Os02t0175500-01 | Rice | golgi | 64.25 | 61.28 |
| Os08t0225400-01 | Rice | cytosol, golgi | 63.71 | 57.38 |
| Os01t0133700-00 | Rice | cytosol | 22.58 | 38.01 |
| Os01t0875800-01 | Rice | golgi | 37.9 | 36.72 |
| Os12t0635500-01 | Rice | golgi, plasma membrane, plastid | 38.44 | 35.14 |
| Os08t0110400-01 | Rice | cytosol, golgi, peroxisome | 36.29 | 33.17 |
| Os04t0272400-01 | Rice | golgi, nucleus, peroxisome | 36.02 | 32.52 |
| Os03t0731050-00 | Rice | plastid | 36.83 | 32.01 |
| Os01t0695200-01 | Rice | plastid | 30.65 | 31.41 |
| Os01t0133600-00 | Rice | golgi, mitochondrion, plasma membrane, plastid | 34.41 | 30.62 |
| Os05t0170000-02 | Rice | golgi | 32.8 | 30.58 |
| Os10t0165000-01 | Rice | golgi | 32.8 | 30.2 |
| Os02t0327500-01 | Rice | golgi | 34.14 | 28.93 |
Protein Annotations
| MapMan:35.1 | EntrezGene:4341964 | EMBL:AK104088 | ProteinID:BAD54008.1 | ProteinID:BAF20393.1 | ProteinID:BAS99336.1 |
| ProteinID:EEE66300.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016740 | InterPro:Glyco_trans_14 | EnsemblPlantsGene:Os06g0700500 | EnsemblPlants:Os06t0700500-01 | PFAM:PF02485 |
| PANTHER:PTHR31042 | PANTHER:PTHR31042:SF12 | UniProt:Q5Z845 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0000446EFD |
| RefSeq:XP_015640889.1 | RefSeq:XP_015640890.1 | : | : | : | : |
Description
Protein of unknown function DUF266, plant family protein. (Os06t0700500-01);Protein of unknown function DUF266, plant family protein. (Os06t0700500-02)
Coordinates
chr6:-:29462562..29467266
Molecular Weight (calculated)
43245.8 Da
IEP (calculated)
8.310
GRAVY (calculated)
-0.285
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPRNRSSAR RPLWIVILIA FVCAVGIGAY LYTPQHYTPC YLVSSNSCSS RPPPEPARVY TDDEIAARIV IRDIILAQPV QSKNPKIAFM FLTPSSLPFE
101: KLWEKFFMGH EDRYTIYVHA SRERPVHASP IFNGRDIRSE KVVWGTISMI DAERRLLANA LQDPDNQHFV LLSESCVPLH NFDYVYSYLM ETNISFVDCF
201: DDPGPHGAGR YSDHMLPEIV KRDWRKGAQW FTVKRQHAVL ILSDFLYYAK FKRYCKPGNE WHNCYSDEHY LPTLFNMVDP TGIANWSVTH VDWSEGKWHP
301: KAYRAVDTSF ELLKNISSID ESIHVTSNAK HQVMRRPCLW NGMKRPCYLF ARKFYPEALD NLMNIFSNFT II
101: KLWEKFFMGH EDRYTIYVHA SRERPVHASP IFNGRDIRSE KVVWGTISMI DAERRLLANA LQDPDNQHFV LLSESCVPLH NFDYVYSYLM ETNISFVDCF
201: DDPGPHGAGR YSDHMLPEIV KRDWRKGAQW FTVKRQHAVL ILSDFLYYAK FKRYCKPGNE WHNCYSDEHY LPTLFNMVDP TGIANWSVTH VDWSEGKWHP
301: KAYRAVDTSF ELLKNISSID ESIHVTSNAK HQVMRRPCLW NGMKRPCYLF ARKFYPEALD NLMNIFSNFT II
001: MKAVKRWSIG NLADIPVSLP GARYRAPPPG RRRVWIIMVL SLITMFFIMA YMYPHHSKRA CYMISSRGCK ALADWLPPSL REYSDDEIAA RVVIREILSS
101: PPVIRKNSKI AFMFLTPGTL PFERLWDRFF LGHEGKFSVY IHASKERPVH YSRYFLNREI RSDEVVWGRI SMVDAERRLL ANALRDTSNQ QFVLLSDSCV
201: PLRSFEYIYN YLMHSNLSYV DCFDDPGQHG AGRHMNHMLP EIPKKDFRKG AQWFTMKRQH AVATMADSLY YSKFRDYCGP GIENNKNCIA DEHYLPTFFH
301: MLDPGGIANW TVTQVDWSER KWHPKTYMPE DITHELLNNL TSTDTLVHVT SVGMGEEIWM PCMWNGIQRP CYLFGRKFHP DTLDKLLDLF SNYTRSVTWN
401: L
101: PPVIRKNSKI AFMFLTPGTL PFERLWDRFF LGHEGKFSVY IHASKERPVH YSRYFLNREI RSDEVVWGRI SMVDAERRLL ANALRDTSNQ QFVLLSDSCV
201: PLRSFEYIYN YLMHSNLSYV DCFDDPGQHG AGRHMNHMLP EIPKKDFRKG AQWFTMKRQH AVATMADSLY YSKFRDYCGP GIENNKNCIA DEHYLPTFFH
301: MLDPGGIANW TVTQVDWSER KWHPKTYMPE DITHELLNNL TSTDTLVHVT SVGMGEEIWM PCMWNGIQRP CYLFGRKFHP DTLDKLLDLF SNYTRSVTWN
401: L
Arabidopsis Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4E9]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.