Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27341663
|
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG20769 | Sorghum | golgi | 95.99 | 96.51 |
| Zm00001d014668_P001 | Maize | plasma membrane | 92.78 | 93.28 |
| Os06t0700500-01 | Rice | golgi | 87.43 | 87.9 |
| TraesCS7D01G412700.1 | Wheat | golgi | 84.49 | 85.41 |
| TraesCS7A01G419900.1 | Wheat | golgi | 84.22 | 85.14 |
| TraesCS7B01G320800.1 | Wheat | golgi | 84.22 | 85.14 |
| HORVU7Hr1G097200.3 | Barley | golgi | 83.96 | 84.86 |
| GSMUA_Achr7P08690_001 | Banana | endoplasmic reticulum, golgi | 56.15 | 70.95 |
| GSMUA_Achr11P... | Banana | cytosol | 53.48 | 68.73 |
| GSMUA_Achr4P12520_001 | Banana | golgi | 68.45 | 65.47 |
| GSMUA_Achr4P05750_001 | Banana | golgi | 66.58 | 63.68 |
| Zm00001d015429_P004 | Maize | golgi | 63.1 | 62.6 |
| Zm00001d026261_P001 | Maize | golgi, mitochondrion | 63.37 | 61.88 |
| Zm00001d024348_P002 | Maize | mitochondrion | 60.96 | 61.62 |
| Zm00001d002382_P002 | Maize | golgi, mitochondrion | 63.37 | 61.24 |
| Zm00001d053763_P001 | Maize | golgi | 63.37 | 61.08 |
| Zm00001d036668_P004 | Maize | plasma membrane | 60.96 | 60.32 |
| Zm00001d046936_P002 | Maize | golgi | 59.09 | 55.67 |
| Zm00001d033892_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 36.9 | 37.81 |
| Zm00001d033891_P001 | Maize | cytosol, golgi, plasma membrane | 38.24 | 35.48 |
| Zm00001d031187_P002 | Maize | plastid | 37.43 | 35.18 |
| Zm00001d041221_P001 | Maize | golgi, mitochondrion, plasma membrane, plastid | 36.9 | 34.85 |
| Zm00001d033890_P001 | Maize | golgi | 38.77 | 34.44 |
| Zm00001d035039_P001 | Maize | plasma membrane | 37.7 | 34.06 |
| Zm00001d039970_P001 | Maize | plastid | 32.35 | 32.79 |
| Zm00001d026711_P001 | Maize | cytosol, golgi, plasma membrane | 38.24 | 32.72 |
| Zm00001d042652_P001 | Maize | golgi, peroxisome, vacuole | 36.9 | 32.09 |
| Zm00001d043768_P001 | Maize | golgi, mitochondrion, plastid | 32.09 | 30.69 |
| Zm00001d008568_P001 | Maize | golgi | 31.02 | 30.13 |
| Zm00001d039969_P001 | Maize | plasma membrane | 31.55 | 29.28 |
| Zm00001d016103_P001 | Maize | golgi, plasma membrane, plastid | 34.76 | 29.15 |
| Zm00001d053393_P002 | Maize | golgi, plastid | 33.42 | 27.84 |
| Zm00001d009810_P003 | Maize | mitochondrion, vacuole | 31.28 | 22.03 |
Protein Annotations
| EMBL:BT064240 | EnsemblPlants:Zm00001d036482_P001 | EnsemblPlants:Zm00001d036482_T001 | EnsemblPlantsGene:Zm00001d036482 | EntrezGene:100276287 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008375 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 |
| GO:GO:0016757 | InterPro:Glyco_trans_14 | PANTHER:PTHR31042 | PANTHER:PTHR31042:SF12 | PFAM:PF02485 | ProteinID:AQK81140.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0001948EB8 | UniProt:C0P7H1 | MapMan:35.1 | : |
Description
Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein
Coordinates
chr6:+:90169969..90174190
Molecular Weight (calculated)
43241.8 Da
IEP (calculated)
8.642
GRAVY (calculated)
-0.289
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPRSRPSSK RPLWFIVLVA FVCAVAIGAY LYTPRHYTAC YLVPSEACNS RPPPEPARVY TDDEIAARAI MRDIIRARPV QSKNPKIAFM FLTPSSLPFE
101: KLWEKFFMGH EDRYTIYVHA SRDRPIHASP VFSGRDIRSE KVIWGTISMV DAEKRLLAHA LQDPENQHFV LLSESCVCVP LHNFDYIYSY LMETNVSFVD
201: CFDDPGPHGA GRYSDHMLPE IVKKDWRKGA QWFTVKRQHA VLILADTLYY GKFKRYCKPG NEWHNCYSDE HYLPTLFNMA DPTGIANWSV THVDWSEGKW
301: HPKVYRAVDT SFELLKNISS IDESVHVSSN AKHVAQRRPC VWNGMKRPCY LFARKFYPEA LGNLMNIFSN FTVI
101: KLWEKFFMGH EDRYTIYVHA SRDRPIHASP VFSGRDIRSE KVIWGTISMV DAEKRLLAHA LQDPENQHFV LLSESCVCVP LHNFDYIYSY LMETNVSFVD
201: CFDDPGPHGA GRYSDHMLPE IVKKDWRKGA QWFTVKRQHA VLILADTLYY GKFKRYCKPG NEWHNCYSDE HYLPTLFNMA DPTGIANWSV THVDWSEGKW
301: HPKVYRAVDT SFELLKNISS IDESVHVSSN AKHVAQRRPC VWNGMKRPCY LFARKFYPEA LGNLMNIFSN FTVI
001: MKAVKRWSIG NLADIPVSLP GARYRAPPPG RRRVWIIMVL SLITMFFIMA YMYPHHSKRA CYMISSRGCK ALADWLPPSL REYSDDEIAA RVVIREILSS
101: PPVIRKNSKI AFMFLTPGTL PFERLWDRFF LGHEGKFSVY IHASKERPVH YSRYFLNREI RSDEVVWGRI SMVDAERRLL ANALRDTSNQ QFVLLSDSCV
201: PLRSFEYIYN YLMHSNLSYV DCFDDPGQHG AGRHMNHMLP EIPKKDFRKG AQWFTMKRQH AVATMADSLY YSKFRDYCGP GIENNKNCIA DEHYLPTFFH
301: MLDPGGIANW TVTQVDWSER KWHPKTYMPE DITHELLNNL TSTDTLVHVT SVGMGEEIWM PCMWNGIQRP CYLFGRKFHP DTLDKLLDLF SNYTRSVTWN
401: L
101: PPVIRKNSKI AFMFLTPGTL PFERLWDRFF LGHEGKFSVY IHASKERPVH YSRYFLNREI RSDEVVWGRI SMVDAERRLL ANALRDTSNQ QFVLLSDSCV
201: PLRSFEYIYN YLMHSNLSYV DCFDDPGQHG AGRHMNHMLP EIPKKDFRKG AQWFTMKRQH AVATMADSLY YSKFRDYCGP GIENNKNCIA DEHYLPTFFH
301: MLDPGGIANW TVTQVDWSER KWHPKTYMPE DITHELLNNL TSTDTLVHVT SVGMGEEIWM PCMWNGIQRP CYLFGRKFHP DTLDKLLDLF SNYTRSVTWN
401: L
Arabidopsis Description
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q8W4E9]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.