Factsheet for Zm00001d014668_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG20769	Sorghum	golgi	94.62	94.62
Zm00001d036482_P001	Maize	plasma membrane	93.28	92.78
Os06t0700500-01	Rice	golgi	85.75	85.75
TraesCS7D01G412700.1	Wheat	golgi	83.87	84.32
TraesCS7A01G419900.1	Wheat	golgi	83.6	84.05
TraesCS7B01G320800.1	Wheat	golgi	83.6	84.05
HORVU7Hr1G097200.3	Barley	golgi	83.33	83.78
GSMUA_Achr7P08690_001	Banana	endoplasmic reticulum, golgi	55.38	69.59
GSMUA_Achr11P...	Banana	cytosol	52.42	67.01
GSMUA_Achr4P12520_001	Banana	golgi	67.74	64.45
GSMUA_Achr4P05750_001	Banana	golgi	66.67	63.43
Zm00001d015429_P004	Maize	golgi	63.17	62.33
Zm00001d024348_P002	Maize	mitochondrion	61.56	61.89
Zm00001d002382_P002	Maize	golgi, mitochondrion	64.25	61.76
Zm00001d026261_P001	Maize	golgi, mitochondrion	63.44	61.62
Zm00001d036668_P004	Maize	plasma membrane	61.83	60.85
Zm00001d053763_P001	Maize	golgi	63.44	60.82
Zm00001d046936_P002	Maize	golgi	59.95	56.17
Zm00001d033892_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	36.29	36.99
Zm00001d031187_P002	Maize	plastid	37.37	34.92
Zm00001d033891_P001	Maize	cytosol, golgi, plasma membrane	37.37	34.49
Zm00001d041221_P001	Maize	golgi, mitochondrion, plasma membrane, plastid	36.56	34.34
Zm00001d033890_P001	Maize	golgi	38.71	34.2
Zm00001d035039_P001	Maize	plasma membrane	36.56	32.85
Zm00001d026711_P001	Maize	cytosol, golgi, plasma membrane	37.63	32.04
Zm00001d039970_P001	Maize	plastid	31.72	31.98
Zm00001d042652_P001	Maize	golgi, peroxisome, vacuole	36.56	31.63
Zm00001d043768_P001	Maize	golgi, mitochondrion, plastid	31.99	30.43
Zm00001d008568_P001	Maize	golgi	30.11	29.09
Zm00001d039969_P001	Maize	plasma membrane	31.18	28.78
Zm00001d016103_P001	Maize	golgi, plasma membrane, plastid	34.41	28.7
Zm00001d053393_P002	Maize	golgi, plastid	33.06	27.39
Zm00001d009810_P003	Maize	mitochondrion, vacuole	31.45	22.03

Protein Annotations

EMBL:BT086307	EnsemblPlants:Zm00001d014668_P001	EnsemblPlants:Zm00001d014668_T001	EnsemblPlantsGene:Zm00001d014668	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757
InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF12	PFAM:PF02485	ProteinID:AQK66768.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI0001A4C4DC	UniProt:C4J660	MapMan:35.1	:	:

Description

Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein

Coordinates

chr5:-:58174262..58178633

Molecular Weight (calculated)

43137.7 Da

IEP (calculated)

8.159

GRAVY (calculated)

-0.265

Length

372 amino acids

Sequence
(BLAST)

001: MAPRSRAPSR RPLWFIVLVA FVCVVAIGAY LYTPQHYTAC YLVPSEACNS RPPPEPARVY TDDEIAARVI MRDIIRARPV QSKNTKIAFM FLTPSLLPFE
101: KLWEKFFMGH EDRYTIYVHA SRDIPSHSSP IFAGRDIRSE KVIWGTISML DAEKRLLAHA LQDPENQHFV LLSESCVPLH NFDYIYSYLM ETNVSFVDCF
201: DDPGPHGAGR YSEHMLPEIV KKDWRKGAQW FTVKRQHAIL ILADTLYYGK FKRYCKPGNE WHNCYSDEHY LPTLFNMVDP TGISNWSVTH VDWSEGKWHP
301: KVYRAADTSF DLLKDIASID ESVHVSSNAK HVAQRRPCVW NGMKRPCYLF ARKFYPEALD NLLNIFSNFT II

Best Arabidopsis Sequence Match ( AT2G19160.1 )
(BLAST)

001: MKAIKGWRLG KINYMQSLPG ARHRAPTRKP IWIIAVLSLI AMFVIGAYMF PHHSKAACYM FSSKGCKGLT DWLPPSLREY SDDEIAARVV ISEILSSPRV
101: IKKSSKIAFM FLTPGTLPFE KLWDLFFQGH EGKFSVYIHA SKDTPVHTSR YFLNREIRSD EVVWGRISMI DAERRLLTNA LRDPENQQFV LLSDSCVPLR
201: SFEYMYNYMM HSNVSYVDCF DDPGPHGTGR HMDHMLPEIP REDFRKGAQW FSMKRQHAVV TVADNLYYSK FRDYCGPGVE GNKNCIADEH YLPTFFYMLD
301: PTGIANWTVT YVDWSERKWH PRKYMPEDIT LELIKNISSI DAVSRVTSEK NGVVSWTHCM WNGIKRPCYL FGRKFHADTL DKLMELFPNY TSIV

Arabidopsis Description

At2g19160 [Source:UniProtKB/TrEMBL;Acc:Q8W460]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.