Factsheet for Zm00001d031187_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041221_P001	Maize	golgi, mitochondrion, plasma membrane, plastid	82.16	82.58
KXG24124	Sorghum	cytosol, golgi, plasma membrane, plastid	84.17	82.31
Os12t0635500-01	Rice	golgi, plasma membrane, plastid	70.1	68.55
HORVU5Hr1G077980.1	Barley	cytosol, plastid	30.15	65.57
TraesCS3B01G478200.1	Wheat	mitochondrion	57.54	64.87
TraesCS5B01G008600.1	Wheat	endoplasmic reticulum, golgi, peroxisome	65.83	63.13
HORVU5Hr1G001360.2	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	58.29	61.38
HORVU5Hr1G001380.1	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	63.07	61.22
TraesCS5A01G010800.1	Wheat	endoplasmic reticulum, golgi, peroxisome, plastid	64.57	61.19
HORVU5Hr1G078030.1	Barley	cytosol, golgi, peroxisome, plastid	63.07	60.05
TraesCS5D01G015600.1	Wheat	cytosol, golgi, mitochondrion	64.82	58.64
GSMUA_Achr1P04580_001	Banana	cytosol	40.45	54.39
Zm00001d033892_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	49.5	53.97
GSMUA_Achr1P04590_001	Banana	cytosol	40.2	52.81
Zm00001d033890_P001	Maize	golgi	54.02	51.07
Zm00001d033891_P001	Maize	cytosol, golgi, plasma membrane	51.51	50.87
Zm00001d008568_P001	Maize	golgi	42.71	44.16
Zm00001d039970_P001	Maize	plastid	40.45	43.63
Zm00001d039969_P001	Maize	plasma membrane	42.21	41.69
Zm00001d042652_P001	Maize	golgi, peroxisome, vacuole	43.22	40.0
Zm00001d035039_P001	Maize	plasma membrane	41.21	39.61
Zm00001d026711_P001	Maize	cytosol, golgi, plasma membrane	43.22	39.36
Zm00001d016103_P001	Maize	golgi, plasma membrane, plastid	43.72	39.01
Zm00001d024348_P002	Maize	mitochondrion	35.68	38.38
Zm00001d053393_P002	Maize	golgi, plastid	42.96	38.08
Zm00001d036482_P001	Maize	plasma membrane	35.18	37.43
Zm00001d014668_P001	Maize	plasma membrane	34.92	37.37
Zm00001d015429_P004	Maize	golgi	34.42	36.34
Zm00001d002382_P002	Maize	golgi, mitochondrion	35.18	36.18
Zm00001d036668_P004	Maize	plasma membrane	34.17	35.98
Zm00001d053763_P001	Maize	golgi	34.92	35.82
Zm00001d026261_P001	Maize	golgi, mitochondrion	34.17	35.51
Zm00001d046936_P002	Maize	golgi	32.16	32.24
Zm00001d043768_P001	Maize	golgi, mitochondrion, plastid	29.15	29.67
Zm00001d009810_P003	Maize	mitochondrion, vacuole	30.4	22.79

Protein Annotations

EMBL:BT069642	EnsemblPlants:Zm00001d031187_P002	EnsemblPlants:Zm00001d031187_T002	EnsemblPlantsGene:Zm00001d031187	EntrezGene:100384266	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0008375	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0016757	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF28	PFAM:PF02485	ProteinID:ONM02291.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI000195D0BF	UniProt:C0PMX3	MapMan:35.1	:

Description

Core-2/I-branching beta-16-N-acetylglucosaminyltransferase family protein

Coordinates

chr1:-:181633974..181636095

Molecular Weight (calculated)

43324.1 Da

IEP (calculated)

9.807

GRAVY (calculated)

-0.105

Length

398 amino acids

Sequence
(BLAST)

001: MLIGMPQAAA AVVHGKDPST VRPAAALPLK LLRPLLLVAV LGTGFLAAVA LLVGGPAYSS ALPRPPVALP PAPPSGGGKQ PLERWARAPA SAWHNMTDDE
101: LLWAASWRPS VRRYPYRRTP KVAFMFLTRG PLPLAPLWER FFAGAGGGDA GLFSVYVHAT PGYRPDFAPA SAFYRRQVPS QVAEWGEPSM FDAERRLLAN
201: ALLDPGNERF VLLSESCVPL YGFPAVYSYL TRSRESFVGA FDDPGPGGRG RYQGGLAPEV VREQFRKGAQ WFELERALAV DVVADGRYYP KFREHCRPPC
301: YADEHYLPTA LSILAPARIA NRSVTWVDWS RGGAHPATFG EADVGEAFLR RLTAPGKDQG NCTYNGQPAQ VCFLFARKLA PGTLQPLLRL APKLLGYG

Best Arabidopsis Sequence Match ( AT1G51770.1 )
(BLAST)

001: MKVMVMEMEE CVKENGSSTP KSRVTNQSRA LLPLRLLQIL LLFLVLTLGI SVVSIHMIKF LKIQRLDPVA PITLLSTYNH ESVTLDSFIR PPSNVWHTMN
101: DSELLWRASI EPQRNGYPFR RVPKLAFMFL AKGPLPFAPL WEKFCKGHEG LYSIYVHSLP SYKSDFSRSS VFYRRYIPSQ AVAWGEMSMG EAERRLLANA
201: LLDISNEWFV LLSESCIPLR GFSFIYSYVS ESRYSFMGAA DEEGPDGRGR YRTEMEPEIT LSQWRKGSQW FEINRKLAVE IVQDTTYYPK FKEFCRPPCY
301: VDEHYFPTML SMKHRVLLAN RTLTWTDWSR GGAHPATFGK ADVTESFLKK LTGAKSCLYN DHQSQICYLF ARKFAPSALE PLLQLAPKIL ELGSNISSTR
401: HSWYLF

Arabidopsis Description

Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q1G300]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.