CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid

Predictor Summary:

plastid 3
mitochondrion 4
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043768_P001	Maize	golgi, mitochondrion, plastid	94.12	94.12
HORVU3Hr1G065000.4	Barley	cytosol	68.29	82.66
Os01t0695200-01	Rice	plastid	75.7	81.54
TraesCS3A01G258700.1	Wheat	golgi, mitochondrion, plastid	81.33	80.92
TraesCS3D01G258800.1	Wheat	golgi, mitochondrion, plastid	80.82	80.2
TraesCS3B01G291600.1	Wheat	plastid	80.56	76.09
Solyc02g036250.1.1	Tomato	cytosol	22.76	56.69
GSMUA_Achr3P28930_001	Banana	golgi	53.2	54.31
GSMUA_Achr9P21910_001	Banana	golgi	52.69	53.37
KRH11480	Soybean	mitochondrion	50.13	51.99
VIT_10s0116g00980.t01	Wine grape	golgi	49.62	51.05
PGSC0003DMT400042390	Potato	golgi	48.59	50.67
Bra034487.1-P	Field mustard	mitochondrion	48.08	50.4
CDY24895	Canola	mitochondrion	48.08	50.4
CDY31228	Canola	golgi	47.57	50.27
Solyc02g080970.2.1	Tomato	plastid	50.13	50.13
CDY21023	Canola	golgi	47.83	49.73
PGSC0003DMT400055283	Potato	golgi	47.06	49.46
Bra016802.1-P	Field mustard	golgi	47.31	49.2
CDY08638	Canola	mitochondrion	47.57	49.08
AT1G11940.1	Thale cress	golgi	47.06	48.04
AT1G62305.1	Thale cress	golgi	46.29	47.88
KRH36494	Soybean	mitochondrion	50.38	46.79
CDY34605	Canola	golgi	45.01	46.56
Bra031797.1-P	Field mustard	cytosol	38.36	44.38
EES19116	Sorghum	golgi	42.2	43.31
CDY66259	Canola	cytosol	38.36	34.88
KXG20769	Sorghum	golgi	31.2	32.8
KXG24737	Sorghum	golgi	30.18	30.81
EER93518	Sorghum	golgi, plasma membrane, plastid	29.92	30.31
EER93516	Sorghum	golgi	29.41	30.26
EES12818	Sorghum	golgi	29.67	29.97
EES03971	Sorghum	golgi	29.67	29.37
KXG20537	Sorghum	mitochondrion	28.39	29.37
EER93517	Sorghum	golgi, mitochondrion, plasma membrane	30.18	29.35
EES14395	Sorghum	endoplasmic reticulum, golgi, plastid	30.43	28.88
EES02542	Sorghum	golgi	29.92	28.82
KXG24124	Sorghum	cytosol, golgi, plasma membrane, plastid	29.67	28.5
EES04616	Sorghum	golgi	27.88	28.24
EES02543	Sorghum	golgi	28.39	27.96
EES11719	Sorghum	golgi, mitochondrion, peroxisome	30.18	26.46
KXG31955	Sorghum	golgi	27.88	25.95
OQU75988	Sorghum	golgi, mitochondrion, plastid, vacuole	17.39	25.66
OQU84731	Sorghum	plastid	28.39	23.12

Protein Annotations

EnsemblPlants:KXG33181	EnsemblPlantsGene:SORBI_3003G266900	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008375
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:Glyco_trans_14	PANTHER:PTHR31042	PANTHER:PTHR31042:SF2
PFAM:PF02485	ProteinID:KXG33181	ProteinID:KXG33181.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI00081AEAAC
UniProt:A0A1B6Q5I5	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:60360581..60365594

Molecular Weight (calculated)

44537.1 Da

IEP (calculated)

10.318

GRAVY (calculated)

-0.198

Length

391 amino acids

Sequence
(BLAST)

001: MPVKRSASVA ALLPPVVGRR ARARLCVRLA APLTFLLLFV ALFRTQSLLG IPPAAPPPSA GPAKVAFLFL VRAGVPLDFL WDAFFRNGEE GRFSVYVHSA
101: PGFQLDRTTT GSPYFYGRQL ARSVKVVWGE ATMVEAERML FAAALQDPAN QRFVLLSDSC VPLYNFSSIY TYLMASPKSF VDSFVDKTEK RYNQNMSPAI
201: PKDKWRKGSQ WVVLIRKHAE VVVGDKKLLK VFRRHCQMVV TKSLLGRRPN ARRLGFTFRR KQKGVAQQEH DCIPDEHYVQ TLFSIKGLED ELERRTLTYT
301: SWNQSSNPKD KMTWHPMVFE YDTSSPEHIN AIKRIDHVNY QMEQRTEWCQ CNGTLVPCFL FARKFSYSAA MHLLEQGAIG TPKSAQLMIN F

Best Arabidopsis Sequence Match ( AT1G62305.1 )
(BLAST)

001: MPRLPSSRRG VVWFRWKILI TISTALCILA LFCINRQSNS TATTTTLSSS LSVARSRIPL VKYSGDRPKL AFLFLARRDL PLDFLWDRFF KSADQRNFSI
101: YVHSIPGFVF DESSTRSHFF YNRQLKNSIE VVWGESSMIA AERLLLASAL EDPSNQRFVL LSDSCVPLYD FGYIYRYLVS SPKSFVDSFL DKDNRYTMKM
201: FPVIRKEKWR KGSQWISLIR SHAEVIVNDD TVFPVFQKFC KRSLPLDPRK NWLYLKKRRH NCIPDEHYVQ TLLTMRGLEN EMERRTVTYT TWNLSAKKAE
301: AKSWHPLTFT SDNCGPEEIE GIKKINHVYY ESEYRTEWCR ANSKPVPCFL FARKFTRGAA MRLLSEGLIE SSIDTTTF

Arabidopsis Description

At1g62305 [Source:UniProtKB/TrEMBL;Acc:Q6DST3]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.