Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- golgi 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400035937 | Potato | mitochondrion | 59.22 | 77.55 |
| KRH05512 | Soybean | nucleus | 72.21 | 72.97 |
| KRH15500 | Soybean | nucleus | 70.39 | 71.32 |
| Solyc08g065860.2.1 | Tomato | golgi | 70.39 | 71.13 |
| VIT_09s0002g02660.t01 | Wine grape | cytosol | 54.29 | 71.09 |
| GSMUA_Achr3P25730_001 | Banana | golgi | 61.56 | 66.02 |
| EER93518 | Sorghum | golgi, plasma membrane, plastid | 64.42 | 64.25 |
| GSMUA_Achr1P14240_001 | Banana | golgi | 59.22 | 63.69 |
| TraesCS4A01G253400.1 | Wheat | golgi, plasma membrane, plastid | 63.38 | 62.4 |
| TraesCS4D01G061000.1 | Wheat | golgi, plasma membrane, plastid | 62.86 | 61.73 |
| TraesCS4B01G062000.1 | Wheat | golgi, plasma membrane, plastid | 62.6 | 61.48 |
| Zm00001d033892_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 57.4 | 60.55 |
| VIT_01s0011g03840.t01 | Wine grape | cytosol | 46.49 | 60.47 |
| VIT_14s0006g02700.t01 | Wine grape | cytosol | 46.49 | 60.47 |
| HORVU4Hr1G010270.2 | Barley | golgi, peroxisome | 62.08 | 59.75 |
| VIT_17s0000g03410.t01 | Wine grape | cytosol | 45.19 | 58.98 |
| Zm00001d033890_P001 | Maize | golgi | 64.16 | 58.67 |
| VIT_17s0000g03400.t01 | Wine grape | cytosol | 44.94 | 58.45 |
| EER93516 | Sorghum | golgi | 57.66 | 58.42 |
| VIT_17s0000g03420.t01 | Wine grape | cytosol | 43.9 | 57.48 |
| EER93517 | Sorghum | golgi, mitochondrion, plasma membrane | 58.18 | 55.72 |
| Zm00001d033891_P001 | Maize | cytosol, golgi, plasma membrane | 58.18 | 55.58 |
| Os03t0731050-00 | Rice | plastid | 60.0 | 53.97 |
| VIT_12s0035g01710.t01 | Wine grape | golgi | 49.09 | 49.87 |
| VIT_01s0011g03850.t01 | Wine grape | golgi, plastid | 49.35 | 46.91 |
| VIT_14s0066g00820.t01 | Wine grape | cytosol, golgi, mitochondrion, plastid | 30.65 | 36.42 |
| VIT_11s0103g00490.t01 | Wine grape | golgi, plastid | 36.62 | 34.99 |
| VIT_04s0008g02630.t01 | Wine grape | golgi | 35.32 | 34.78 |
| VIT_10s0116g00980.t01 | Wine grape | golgi | 31.43 | 31.84 |
Protein Annotations
| EntrezGene:100249300 | MapMan:35.1 | EMBL:AM472760 | ProteinID:CAN70606 | ProteinID:CAN70606.1 | ProteinID:CCB46542 |
| ProteinID:CCB46542.1 | UniProt:F6H386 | EMBL:FN595231 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0008375 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | InterPro:Glyco_trans_14 | PFAM:PF02485 |
| PANTHER:PTHR31042 | PANTHER:PTHR31042:SF54 | TIGR:TC53806 | TIGR:TC64770 | TMHMM:TMhelix | UniParc:UPI00015C883E |
| ArrayExpress:VIT_04s0008g00690 | EnsemblPlantsGene:VIT_04s0008g00690 | EnsemblPlants:VIT_04s0008g00690.t01 | unigene:Vvi.6772 | RefSeq:XP_010648315.1 | : |
Description
No Description!
Coordinates
chr4:+:623304..627444
Molecular Weight (calculated)
44173.4 Da
IEP (calculated)
9.645
GRAVY (calculated)
-0.206
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSRALSTEE GKDPANTSRT NQSRVLPLRL LQIFGLFLAL CVAFSVISVY MIKRFGVSTT LTSPQSSFQP CYEEVGGLDR WIKPPSTLLH TMNDTELLWR
101: ASFAPKVKKY PFQRVPKVAF MFLTKGPLPL GPLWERFLKG HEGLYSIYIH STPSFQANFP ASSVFYRRQI PSKVAEWGRM SMCDAERRLL ANALLDISNE
201: RFVLLSESCI PLYNFTLIYH YIMKSKYSFM GAFDDPGPYG RGRYNGNMKP EVSISQWRKG AQWFEVNRKL AVNIVEDTTF YKKFEEFCKP ACYVDEHYFP
301: TMLTIQSGHL IANRSITWVD WSRGGAHPAT FGKADITEEF LHRVVSNHKC LYNNQPSSTC FLFARKFAPS TLEPLLQLAH KHLGF
101: ASFAPKVKKY PFQRVPKVAF MFLTKGPLPL GPLWERFLKG HEGLYSIYIH STPSFQANFP ASSVFYRRQI PSKVAEWGRM SMCDAERRLL ANALLDISNE
201: RFVLLSESCI PLYNFTLIYH YIMKSKYSFM GAFDDPGPYG RGRYNGNMKP EVSISQWRKG AQWFEVNRKL AVNIVEDTTF YKKFEEFCKP ACYVDEHYFP
301: TMLTIQSGHL IANRSITWVD WSRGGAHPAT FGKADITEEF LHRVVSNHKC LYNNQPSSTC FLFARKFAPS TLEPLLQLAH KHLGF
001: MQNRIVQLEE GKENGITVRS GHYKGFPSKL LLLLGLFLTF SVTVFIISVS TIKYTGIQSV VTTVTSSFVP CREGEPNSLS KWIQPPAVLM HNMSDEELLW
101: RASFWPRRKE YPFKRVPKVA FMFLTKGPLP LASLWERFLK GHKGLYSVYL HPHPSFTAKF PASSVFHRRQ IPSQVAEWGR MSMCDAEKRL LANALLDVSN
201: EWFVLVSESC IPLYNFTTIY SYLSRSKHSF MGAFDDPGPF GRGRYNGNME PEVPLTKWRK GSQWFEVNRD LAATIVKDTL YYPKFKEFCR PACYVDEHYF
301: PTMLTIEKPT VLANRSLTWV DWSRGGPHPA TFGRSDITEN FFGKIFDGRN CSYNGRNTSM CYLFARKFAP SALEPLLHIA PKILGF
101: RASFWPRRKE YPFKRVPKVA FMFLTKGPLP LASLWERFLK GHKGLYSVYL HPHPSFTAKF PASSVFHRRQ IPSQVAEWGR MSMCDAEKRL LANALLDVSN
201: EWFVLVSESC IPLYNFTTIY SYLSRSKHSF MGAFDDPGPF GRGRYNGNME PEVPLTKWRK GSQWFEVNRD LAATIVKDTL YYPKFKEFCR PACYVDEHYF
301: PTMLTIEKPT VLANRSLTWV DWSRGGPHPA TFGRSDITEN FFGKIFDGRN CSYNGRNTSM CYLFARKFAP SALEPLLHIA PKILGF
Arabidopsis Description
At5g11730 [Source:UniProtKB/TrEMBL;Acc:Q9LYF7]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.